iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__3158__AT5G37490.1	fgenesh2_kg.7__3158__AT5G37490.1	fgenesh2_kg.7__3158__AT5G37490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-33	114.2	34	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef CpIs +lM+dPv++++Gitydr+sIe w++sg+ktcPvt++ lt  d++Pn+t+r++iq wc e++s
   Q: 34   IPPEFQCPISIDLMKDPVIISTGITYDRESIETWISSGNKTCPVTNTVLTTFDQIPNHTIRKMIQGWCVEKGS 106
           8*******************************************************************99875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGFLWRTRLR GANEKKITPV ISWPESEPES EITIPPEFQC PISIDLMKDP VIISTGITYD 60
RESIETWISS GNKTCPVTNT VLTTFDQIPN HTIRKMIQGW CVEKGSPLIQ RIPTPRVPLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCAACTGA AAATTCTTAT TCCTTGAAAA TTCAATGGTC AAAAGTTTTC ATTTCTAAGA 60
CCAACCCAGC TTGCAAATTA GACCTAATAA AACCTTCCTC ATTCTCTCTT TTCCCCTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_493725

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	40.34	5.00e-80	290.00
IUUC-Ath-007692	Arabidopsis thaliana	90.41	0.00e+00	721.00
IUUC-Bdi-014644	Brachypodium distachyon	38.72	7.00e-71	260.00
IUUC-Bol-016269	Brassica oleracea	79.67	0.00e+00	653.00
IUUC-Bra-017285	Brassica rapa	79.22	0.00e+00	657.00
IUUC-Gma-043784	Glycine max	45.82	5.00e-98	350.00
IUUC-Hvu-047616	Hordeum vulgare	38.26	5.00e-75	274.00
IUUC-Lpe-050701	Leersia perrieri	38.28	9.00e-58	216.00
IUUC-Mac-064511	Musa acuminata	39.91	1.00e-69	256.00
IUUC-Ogl-077061	Oryza glaberrima	39.19	6.00e-55	207.00
IUUC-Ome-081665	Oryza meridionalis	37.23	4.00e-59	221.00
IUUC-Oni-082958	Oryza nivara	39.43	2.00e-52	198.00
IUUC-Opu-083482	Oryza punctata	37.62	4.00e-64	238.00
IUUC-Pop-099312	Populus trichocarpa	49.23	1.00e-103	369.00
IUUC-Ppe-101406	Prunus persica	47.97	4.00e-111	394.00
IUUC-Sit-109976	Setaria italica	39.12	2.00e-77	282.00
IUUC-Sly-111602	Solanum lycopersicum	45.93	1.00e-90	326.00
IUUC-Stu-112797	Solanum tuberosum	46.65	8.00e-91	326.00
IUUC-Sbi-114336	Sorghum bicolor	39.37	9.00e-47	180.00
IUUC-Tca-120967	Theobroma cacao	48.43	4.00e-90	324.00
IUUC-Tae-124576	Triticum aestivum	37.14	4.00e-64	238.00
IUUC-Vvi-131485	Vitis vinifera	48.56	1.00e-94	339.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence