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Tag Content
UUCD2 ID IUUC-Sha-107191
UUCD1 version UUC-SaH-00416
Ensembl Protein ID ENSSHAP00000010623.1
UniProt Accession G3W5B8; G3W5B8_SARHA
Genbank Protein ID ENSSHAP00000010623
Protein Name Uncharacterized protein
Genbank Nucleotide ID AEFK01125008
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000009167.1 ENSSHAT00000010716.1 ENSSHAP00000010623.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.70e-45 149.8 153 187
UBD/Beta-Prp 5.20e-79 265.7 66 269
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 153  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 187
           8*******9659955588999***********886 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev++ kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 66   LSGHEGEVYCSKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERIK-RLKG 153
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 154  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAVQTFQ--NTYQVLTVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 240
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++riWd+r
   Q: 241  SVTGLSLSSEGSYLLSNAMDNTVRIWDVR 269
           ***************************87 PP
   
Organism Sarcophilus harrisii
Protein Sequence
(Fasta)
MIEQHKRKGP ELPLVPLKRP RHELLLGAAG PGAGTGPAAG QQPPPGALLQ AGPPRCSSLQ 60
APIMLLSGHE GEVYCSKFHP NGSTLASAGF DRLILLWNVY GDCDNYATLK GHSGAVMELH 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sha-107191|E3,WD_repeat;UBD,Beta-Prp|Sarcophilus harrisii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTAAACATCT TCACCAATCA CAGCCCGATA TTTTTCGTGA AGGCCGAGGC TTTTGTCCAA 60
TAAGAAAGTG TAAGAAGGAA TTAATAAAGA GAGACCCTTG CTCTGGGGCA TATGCGGGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sha-107191|E3,WD_repeat;UBD,Beta-Prp|Sarcophilus harrisii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding
KEGG shr:100918723
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 57.76 6.00e-119 420.00
IUUC-Aml-001428 Ailuropoda melanoleuca 92.46 7.00e-176 609.00
IUUC-Atr-003164 Amborella trichopoda 59.31 3.00e-121 427.00
IUUC-Apl-003447 Anas platyrhynchos 97.21 6.00e-161 559.00
IUUC-Aca-004270 Anolis carolinensis 90.61 2.00e-167 581.00
IUUC-Aly-005659 Arabidopsis lyrata 62.14 2.00e-123 434.00
IUUC-Ath-006764 Arabidopsis thaliana 61.49 7.00e-123 433.00
IUUC-Acl-008324 Aspergillus clavatus 49.37 2.00e-93 335.00
IUUC-Afl-008607 Aspergillus flavus 50.00 3.00e-89 321.00
IUUC-Afu-008998 Aspergillus fumigatus 49.05 4.00e-93 334.00
IUUC-Ani-009363 Aspergillus nidulans 49.05 2.00e-94 338.00
IUUC-Ang-009513 Aspergillus niger 48.51 6.00e-84 303.00
IUUC-Aor-010237 Aspergillus oryzae 50.63 4.00e-95 341.00
IUUC-Ate-010374 Aspergillus terreus 46.20 1.00e-82 299.00
IUUC-Ame-010728 Astyanax mexicanus 82.37 7.00e-170 589.00
IUUC-Bgr-012297 Blumeria graminis 46.89 4.00e-70 257.00
IUUC-Bta-012433 Bos taurus 91.69 0.00e+00 635.00
IUUC-Bci-013763 Botrytis cinerea 51.42 7.00e-95 340.00
IUUC-Bdi-014490 Brachypodium distachyon 58.12 3.00e-119 421.00
IUUC-Bol-016479 Brassica oleracea 60.90 3.00e-123 434.00
IUUC-Bra-017219 Brassica rapa 61.17 5.00e-123 434.00
IUUC-Cel-018512 Caenorhabditis elegans 56.56 3.00e-113 401.00
IUUC-Cja-019308 Callithrix jacchus 93.35 0.00e+00 637.00
IUUC-Cfa-020998 Canis familiaris 94.18 0.00e+00 640.00
IUUC-Cpo-021580 Cavia porcellus 91.14 0.00e+00 636.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 54.46 1.00e-107 382.00
IUUC-Csa-023456 Chlorocebus sabaeus 92.52 0.00e+00 640.00
IUUC-Cho-024644 Choloepus hoffmanni 97.74 4.00e-177 613.00
IUUC-Cin-025463 Ciona intestinalis 58.91 3.00e-127 447.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 48.73 5.00e-94 337.00
IUUC-Cne-026780 Cryptococcus neoformans 42.59 6.00e-66 244.00
IUUC-Dre-027671 Danio rerio 80.44 2.00e-175 607.00
IUUC-Dno-029769 Dasypus novemcinctus 94.18 0.00e+00 650.00
IUUC-Dor-030776 Dipodomys ordii 91.16 2.00e-83 301.00
IUUC-Dse-031316 Dothistroma septosporum 43.75 4.00e-85 307.00
IUUC-Dme-031756 Drosophila melanogaster 61.46 3.00e-124 437.00
IUUC-Ete-032753 Echinops telfairi 86.98 5.00e-160 556.00
IUUC-Eca-033979 Equus caballus 91.41 0.00e+00 635.00
IUUC-Eeu-034862 Erinaceus europaeus 98.56 7.00e-72 263.00
IUUC-Fca-036110 Felis catus 93.57 2.00e-154 538.00
IUUC-Fal-037648 Ficedula albicollis 97.10 3.00e-175 607.00
IUUC-Fox-037861 Fusarium oxysporum 46.93 3.00e-91 328.00
IUUC-Fso-038405 Fusarium solani 46.93 3.00e-91 328.00
IUUC-Gmo-039383 Gadus morhua 82.64 6.00e-171 592.00
IUUC-Ggr-040082 Gaeumannomyces graminis 46.06 1.00e-83 302.00
IUUC-Gga-040785 Gallus gallus 90.08 8.00e-179 619.00
IUUC-Gac-041645 Gasterosteus aculeatus 82.37 4.00e-168 583.00
IUUC-Gma-044329 Glycine max 60.76 8.00e-122 429.00
IUUC-Ggo-044800 Gorilla gorilla 82.95 1.00e-153 535.00
IUUC-Hsa-045918 Homo sapiens 92.52 0.00e+00 640.00
IUUC-Hvu-047342 Hordeum vulgare 57.76 2.00e-118 418.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 91.44 2.00e-107 381.00
IUUC-Kpa-049149 Komagataella pastoris 34.30 1.00e-36 146.00
IUUC-Lch-050395 Latimeria chalumnae 87.02 0.00e+00 650.00
IUUC-Lpe-051275 Leersia perrieri 58.75 1.00e-120 426.00
IUUC-Loc-052666 Lepisosteus oculatus 85.48 2.00e-171 594.00
IUUC-Lma-053129 Leptosphaeria maculans 45.89 9.00e-88 316.00
IUUC-Laf-054512 Loxodonta africana 93.35 0.00e+00 633.00
IUUC-Mcc-055819 Macaca mulatta 92.52 0.00e+00 640.00
IUUC-Meu-056350 Macropus eugenii 90.58 9.00e-164 569.00
IUUC-Mor-057063 Magnaporthe oryzae 48.73 1.00e-91 329.00
IUUC-Mpo-057369 Magnaporthe poae 47.00 3.00e-84 305.00
IUUC-Mtr-058228 Medicago truncatula 60.52 3.00e-121 427.00
IUUC-Mla-059093 Melampsora laricipopulina 42.99 9.00e-69 253.00
IUUC-Mga-059719 Meleagris gallopavo 96.82 8.00e-177 612.00
IUUC-Mvi-060285 Microbotryum violaceum 39.82 1.00e-62 233.00
IUUC-Mmr-061685 Microcebus murinus 88.09 8.00e-166 575.00
IUUC-Mdo-062121 Monodelphis domestica 99.72 0.00e+00 651.00
IUUC-Mmu-063216 Mus musculus 94.74 0.00e+00 652.00
IUUC-Mac-065463 Musa acuminata 55.31 1.00e-109 389.00
IUUC-Mpu-066390 Mustela putorius furo 94.18 0.00e+00 650.00
IUUC-Mlu-066932 Myotis lucifugus 93.62 2.00e-175 607.00
IUUC-Nfi-068509 Neosartorya fischeri 49.37 3.00e-93 335.00
IUUC-Ncr-068870 Neurospora crassa 48.26 2.00e-92 332.00
IUUC-Nle-069539 Nomascus leucogenys 92.52 0.00e+00 639.00
IUUC-Opr-070555 Ochotona princeps 82.83 2.00e-162 565.00
IUUC-Ont-071490 Oreochromis niloticus 81.87 4.00e-168 583.00
IUUC-Oan-073044 Ornithorhynchus anatinus 80.43 1.00e-156 545.00
IUUC-Ocu-073764 Oryctolagus cuniculus 94.46 0.00e+00 651.00
IUUC-Oba-075704 Oryza barthii 58.75 9.00e-121 426.00
IUUC-Obr-076455 Oryza brachyantha 59.06 1.00e-120 426.00
IUUC-Ogl-077382 Oryza glaberrima 59.06 6.00e-121 426.00
IUUC-Ogu-078739 Oryza glumaepatula 58.75 8.00e-121 426.00
IUUC-Oin-079072 Oryza indica 58.75 8.00e-121 426.00
IUUC-Olo-080809 Oryza longistaminata 58.75 8.00e-121 426.00
IUUC-Ome-081677 Oryza meridionalis 58.75 2.00e-120 424.00
IUUC-Oni-082937 Oryza nivara 58.75 8.00e-121 426.00
IUUC-Opu-083510 Oryza punctata 58.75 8.00e-121 426.00
IUUC-Oru-084360 Oryza rufipogon 58.75 2.00e-120 425.00
IUUC-Osa-085640 Oryza sativa 58.75 1.00e-120 426.00
IUUC-Ola-086504 Oryzias latipes 81.27 1.00e-168 585.00
IUUC-Olu-087869 Ostreococcus lucimarinus 41.31 5.00e-63 234.00
IUUC-Oga-088773 Otolemur garnettii 93.91 0.00e+00 639.00
IUUC-Oar-089677 Ovis aries 90.93 0.00e+00 630.00
IUUC-Ptr-090724 Pan troglodytes 92.20 5.00e-176 610.00
IUUC-Pan-092683 Papio anubis 92.52 0.00e+00 640.00
IUUC-Psi-093415 Pelodiscus sinensis 98.05 7.00e-175 605.00
IUUC-Pma-094562 Petromyzon marinus 75.07 4.00e-166 577.00
IUUC-Pno-095014 Phaeosphaeria nodorum 48.84 4.00e-88 318.00
IUUC-Ppa-095822 Physcomitrella patens 62.14 6.00e-121 426.00
IUUC-Pfo-096579 Poecilia formosa 82.09 9.00e-168 582.00
IUUC-Pab-098313 Pongo abelii 92.52 0.00e+00 640.00
IUUC-Pop-099747 Populus trichocarpa 61.81 5.00e-123 433.00
IUUC-Pca-100871 Procavia capensis 84.29 2.00e-129 454.00
IUUC-Ppe-101389 Prunus persica 61.44 5.00e-124 437.00
IUUC-Pva-102468 Pteropus vampyrus 77.84 6.00e-145 506.00
IUUC-Pgr-103523 Puccinia graminis 41.77 4.00e-72 264.00
IUUC-Ptt-103930 Puccinia triticina 41.69 7.00e-72 263.00
IUUC-Pte-104299 Pyrenophora teres 49.05 1.00e-93 336.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 49.68 9.00e-94 336.00
IUUC-Rno-105796 Rattus norvegicus 93.91 0.00e+00 644.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 38.78 3.00e-63 234.00
IUUC-Spo-108249 Schizosaccharomyces pombe 43.99 3.00e-80 291.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 50.47 2.00e-94 338.00
IUUC-Sit-110805 Setaria italica 57.81 1.00e-119 422.00
IUUC-Sly-111567 Solanum lycopersicum 62.03 5.00e-125 440.00
IUUC-Stu-112562 Solanum tuberosum 62.03 5.00e-126 443.00
IUUC-Sar-112991 Sorex araneus 96.35 3.00e-119 420.00
IUUC-Sbi-114010 Sorghum bicolor 57.50 1.00e-118 419.00
IUUC-Sre-114947 Sporisorium reilianum 42.99 2.00e-73 268.00
IUUC-Ssc-115371 Sus scrofa 91.69 0.00e+00 635.00
IUUC-Tgu-117429 Taeniopygia guttata 94.46 5.00e-173 600.00
IUUC-Tru-118081 Takifugu rubripes 82.37 8.00e-170 589.00
IUUC-Tsy-119101 Tarsius syrichta 82.83 5.00e-155 540.00
IUUC-Tni-120532 Tetraodon nigroviridis 82.37 4.00e-168 583.00
IUUC-Tca-121373 Theobroma cacao 62.46 2.00e-124 438.00
IUUC-Tre-122050 Trichoderma reesei 46.28 4.00e-90 324.00
IUUC-Tvi-122394 Trichoderma virens 45.48 2.00e-84 305.00
IUUC-Tae-124661 Triticum aestivum 57.89 4.00e-118 417.00
IUUC-Tme-126998 Tuber melanosporum 51.46 4.00e-93 334.00
IUUC-Tbe-128032 Tupaia belangeri 94.18 0.00e+00 641.00
IUUC-Ttr-129102 Tursiops truncatus 81.99 2.00e-156 545.00
IUUC-Uma-129363 Ustilago maydis 43.61 1.00e-76 280.00
IUUC-Vda-129891 Verticillium dahliae 49.53 3.00e-93 334.00
IUUC-Vpa-130827 Vicugna pacos 90.86 0.00e+00 632.00
IUUC-Vvi-131202 Vitis vinifera 56.50 6.00e-123 433.00
IUUC-Xtr-132769 Xenopus tropicalis 82.21 8.00e-170 589.00
IUUC-Xma-133147 Xiphophorus maculatus 82.09 2.00e-167 581.00
IUUC-Yli-134352 Yarrowia lipolytica 33.78 6.00e-35 140.00
IUUC-Zma-135294 Zea mays 57.50 2.00e-118 418.00
Created Date 25-Jun-2017

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