iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058643

Ensembl Protein ID

AES68395

UniProt Accession

G7IVC2; G7IVC2_MEDTR

Genbank Protein ID

AES68395.1

Protein Name

E3 ubiquitin protein ligase RIN2

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g007760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g007760	AES68395	AES68395
MTR_3g007760	KEH32837	KEH32837

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-08	34.3	338	380
UBD/Alpha-Helix/CUE	6.90e-10	40.1	550	589

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + l+C+H+fh+ Cl  w  l +      +CP+Cr
   Q: 338  CAICREPMAK-AKKLNCNHLFHLACLRSW--LDQGLTEMYTCPTCR 380
           ********99.999***************..777799999*****8 PP

UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnnLLeg 42
           +  ++e+++e++P+ ++++i ++L ++t+s++ +vnnLL++
   Q: 550  VLAMAETVREVLPHIPDDIIFQDL-QRTNSVTVTVNNLLQM 589
           5789********************.**************98 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MALKFIAISA VSTVLSFVGL QFCTDLSLEK LKSDGLIGWN SIHLDNVDHD IELPLGLYTT 60
IVLLTNCMIN VFVLLNLCLK AMFFSELYPS ETRKLIERLV NYVIYKGTFL PLVVLPTLYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATTATTGA CCCAGAAATA AATAGTCTTT CTTTTTTCTC TGCCTAAACT CTCTCTCTCT 60
CTCTCTCTCT CTCTCTCTCT CTCTCTGTTG ATTCTGAATT CTGAATTGCG AATGATATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g007760

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000658	Aegilops tauschii	39.52	8.00e-25	105.00
IUUC-Atr-003008	Amborella trichopoda	55.39	0.00e+00	634.00
IUUC-Aly-006287	Arabidopsis lyrata	67.23	0.00e+00	816.00
IUUC-Ath-006950	Arabidopsis thaliana	67.06	0.00e+00	793.00
IUUC-Bdi-014169	Brachypodium distachyon	51.21	5.00e-126	444.00
IUUC-Bol-015123	Brassica oleracea	66.61	0.00e+00	782.00
IUUC-Bra-017662	Brassica rapa	65.53	0.00e+00	730.00
IUUC-Fal-036758	Ficedula albicollis	25.38	7.00e-34	138.00
IUUC-Gma-043393	Glycine max	85.74	0.00e+00	1051.00
IUUC-Lpe-051410	Leersia perrieri	58.61	3.00e-69	254.00
IUUC-Mac-065495	Musa acuminata	54.34	7.00e-161	560.00
IUUC-Oba-074987	Oryza barthii	42.25	2.00e-91	328.00
IUUC-Obr-076485	Oryza brachyantha	52.36	2.00e-132	465.00
IUUC-Ogu-078481	Oryza glumaepatula	41.70	9.00e-96	343.00
IUUC-Oin-079556	Oryza indica	48.14	7.00e-128	450.00
IUUC-Olo-080588	Oryza longistaminata	53.79	3.00e-38	150.00
IUUC-Ome-081941	Oryza meridionalis	43.82	1.00e-104	372.00
IUUC-Oni-082488	Oryza nivara	41.13	4.00e-94	338.00
IUUC-Opu-083500	Oryza punctata	46.27	4.00e-105	374.00
IUUC-Oru-085082	Oryza rufipogon	42.25	2.00e-91	328.00
IUUC-Osa-085509	Oryza sativa	52.44	9.00e-135	473.00
IUUC-Ppa-095969	Physcomitrella patens	44.92	2.00e-122	432.00
IUUC-Pop-099346	Populus trichocarpa	69.90	0.00e+00	829.00
IUUC-Ppe-102033	Prunus persica	72.84	0.00e+00	845.00
IUUC-Smo-109664	Selaginella moellendorffii	44.79	9.00e-114	403.00
IUUC-Sit-110161	Setaria italica	52.24	1.00e-141	495.00
IUUC-Sly-111850	Solanum lycopersicum	65.25	0.00e+00	716.00
IUUC-Sbi-113957	Sorghum bicolor	52.25	3.00e-145	507.00
IUUC-Tca-121783	Theobroma cacao	72.67	0.00e+00	867.00
IUUC-Tae-125510	Triticum aestivum	50.00	4.00e-108	384.00
IUUC-Vvi-130989	Vitis vinifera	72.16	0.00e+00	862.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence