iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114070

UUCD1 version

UUC-SoB-00333

Ensembl Protein ID

Sb02g039360.1

UniProt Accession

A0A1B6QFJ8; A0A1B6QFJ8_SORBI

Genbank Protein ID

KXG36696.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G376000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g039360	Sb02g039360.1	Sb02g039360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-08	34.9	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C +++   ++  +vlp CgH+fh dC+ +w       + + +CPlCr
   Q: 104  CAVCITELapgET-ARVLPrCGHAFHVDCVDMW------LRSHSTCPLCR 146
           ********88544.888888*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAVTATTVAA ATTMLAAVAA VFLTLVLCFY IFLCAKRYRG GAPPPPPAHA GAGGVRAWLR 60
TVFGGGGTRA DGGATEWCYD GGLDEKSMAK LPRREVAKGE ALDCAVCITE LAPGETARVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACGACACG ACCACTAAAA CATTTATTGC CTTGAAGAGC TTCGCGGCGC GAACGTCGAG 60
GAGCTTCCGG CAGCAGAAGG GTACACCAGC AAAGCAAAGG CTCCTGCTTG CGTAGGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015037	Brachypodium distachyon	62.43	1.00e-47	182.00
IUUC-Lpe-051060	Leersia perrieri	67.47	6.00e-42	163.00
IUUC-Ogu-078783	Oryza glumaepatula	57.20	2.00e-48	184.00
IUUC-Ome-081407	Oryza meridionalis	58.59	6.00e-45	173.00
IUUC-Oni-082273	Oryza nivara	60.47	3.00e-50	190.00
IUUC-Opu-083611	Oryza punctata	58.89	7.00e-41	159.00
IUUC-Oru-084396	Oryza rufipogon	60.85	5.00e-50	190.00
IUUC-Sit-110055	Setaria italica	68.38	1.00e-62	231.00
IUUC-Tae-123347	Triticum aestivum	61.83	6.00e-51	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence