iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005720

Ensembl Protein ID

fgenesh2_kg.4__125__AT2G22010.1

UniProt Accession

D7LCM9; D7LCM9_ARALL

Genbank Protein ID

EFH56672.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348716

Gene Name

RKP; ARALYDRAFT_481065

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__125__AT2G22010.1	fgenesh2_kg.4__125__AT2G22010.1	fgenesh2_kg.4__125__AT2G22010.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.07	4.00e-45	182.00	IUUC-Hsa-046786

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAEDSLRVGM ISSGLAVLLN GEDAKENSSK ARIVPHFDYS GHRPLERTIE FIFGLAEKSV 60
GPLDGQVDIS LIRAVIKNQF SKLHGELDVS VSQREGISVV HHGVGPPVVG LEEYSLCGDI 120

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Nucleotide Sequence
(Fasta)

TCTCTCTCTC TCTCTCTCTT CGAGGAGGAA GAAAAAAAAG CGAAAAGTCT TCTCCTTTTT 60
TTATTTATTT GAAAAACCCT AACACGAGTC CGCCGTCTTT GGTCTGAAGA ATCTGGGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR001370--BIR_rpt
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR019474--Ub_conjug_fac_E4_core
IPR001841--Znf_RING

PROSITE

PS50188--B302_SPRY
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF10408--Ufd2P_core

SMART

SM00449--SPRY

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0008270--F:zinc ion binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_481065

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002334	Ailuropoda melanoleuca	34.08	4.00e-48	186.00
IUUC-Atr-002731	Amborella trichopoda	58.78	0.00e+00	1476.00
IUUC-Apl-003337	Anas platyrhynchos	26.05	4.00e-85	309.00
IUUC-Aca-005266	Anolis carolinensis	30.45	2.00e-47	184.00
IUUC-Ath-007453	Arabidopsis thaliana	96.80	0.00e+00	2477.00
IUUC-Ame-011173	Astyanax mexicanus	55.03	4.00e-48	186.00
IUUC-Bta-012466	Bos taurus	34.46	6.00e-49	189.00
IUUC-Bol-016281	Brassica oleracea	91.24	0.00e+00	2321.00
IUUC-Bra-016892	Brassica rapa	90.67	0.00e+00	2326.00
IUUC-Cel-018326	Caenorhabditis elegans	35.92	7.00e-17	81.60
IUUC-Cja-019535	Callithrix jacchus	35.01	2.00e-48	187.00
IUUC-Cfa-020260	Canis familiaris	34.73	1.00e-49	191.00
IUUC-Cpo-021921	Cavia porcellus	34.28	2.00e-49	190.00
IUUC-Cre-022617	Chlamydomonas reinhardtii	59.04	2.00e-55	210.00
IUUC-Csa-024158	Chlorocebus sabaeus	34.54	5.00e-48	186.00
IUUC-Cho-025093	Choloepus hoffmanni	47.14	8.00e-19	89.40
IUUC-Cin-025392	Ciona intestinalis	25.27	7.00e-30	124.00
IUUC-Csv-026376	Ciona savignyi	37.58	2.00e-15	75.90
IUUC-Dre-027457	Danio rerio	27.36	1.00e-42	167.00
IUUC-Dno-028922	Dasypus novemcinctus	39.44	2.00e-22	100.00
IUUC-Dor-030129	Dipodomys ordii	34.28	2.00e-48	187.00
IUUC-Dme-032022	Drosophila melanogaster	45.12	3.00e-43	170.00
IUUC-Ete-032681	Echinops telfairi	47.74	1.00e-41	164.00
IUUC-Eca-033488	Equus caballus	29.76	1.00e-47	185.00
IUUC-Eeu-035141	Erinaceus europaeus	26.29	3.00e-31	130.00
IUUC-Fca-036540	Felis catus	34.08	1.00e-47	184.00
IUUC-Fal-036716	Ficedula albicollis	53.02	6.00e-47	182.00
IUUC-Gmo-038827	Gadus morhua	24.53	1.00e-23	103.00
IUUC-Gga-040227	Gallus gallus	53.02	1.00e-46	181.00
IUUC-Gac-041611	Gasterosteus aculeatus	25.62	4.00e-41	161.00
IUUC-Gma-043507	Glycine max	67.71	0.00e+00	1724.00
IUUC-Ggo-045274	Gorilla gorilla	34.54	6.00e-48	186.00
IUUC-Hsa-046786	Homo sapiens	34.73	1.00e-49	191.00
IUUC-Itr-047988	Ictidomys tridecemlineatus	25.79	1.00e-92	334.00
IUUC-Lch-050613	Latimeria chalumnae	27.20	4.00e-42	165.00
IUUC-Lpe-050692	Leersia perrieri	55.84	0.00e+00	1363.00
IUUC-Loc-052484	Lepisosteus oculatus	54.36	6.00e-47	182.00
IUUC-Laf-053359	Loxodonta africana	33.70	6.00e-47	182.00
IUUC-Mcc-054643	Macaca mulatta	34.73	1.00e-49	191.00
IUUC-Meu-056856	Macropus eugenii	22.29	7.00e-27	115.00
IUUC-Mtr-058494	Medicago truncatula	65.41	0.00e+00	1687.00
IUUC-Mga-060198	Meleagris gallopavo	26.35	8.00e-28	118.00
IUUC-Mmr-061762	Microcebus murinus	25.99	6.00e-85	308.00
IUUC-Mdo-062049	Monodelphis domestica	25.04	2.00e-85	310.00
IUUC-Mmu-064274	Mus musculus	25.55	5.00e-93	335.00
IUUC-Mac-064561	Musa acuminata	54.93	0.00e+00	916.00
IUUC-Mpu-066413	Mustela putorius furo	34.08	4.00e-47	183.00
IUUC-Mlu-067411	Myotis lucifugus	34.66	1.00e-49	191.00
IUUC-Nle-069644	Nomascus leucogenys	34.73	2.00e-49	191.00
IUUC-Opr-070465	Ochotona princeps	28.95	1.00e-50	194.00
IUUC-Ont-072552	Oreochromis niloticus	26.20	8.00e-64	238.00
IUUC-Oan-073066	Ornithorhynchus anatinus	36.76	5.00e-15	74.70
IUUC-Ocu-074740	Oryctolagus cuniculus	34.28	1.00e-49	191.00
IUUC-Oba-075088	Oryza barthii	51.34	0.00e+00	1212.00
IUUC-Obr-076657	Oryza brachyantha	54.82	0.00e+00	1288.00
IUUC-Ogl-077313	Oryza glaberrima	58.06	2.00e-110	391.00
IUUC-Ogu-078672	Oryza glumaepatula	50.00	0.00e+00	1158.00
IUUC-Oin-079756	Oryza indica	54.35	0.00e+00	1235.00
IUUC-Olo-080369	Oryza longistaminata	51.34	0.00e+00	1213.00
IUUC-Oni-082996	Oryza nivara	49.76	0.00e+00	1155.00
IUUC-Opu-083892	Oryza punctata	54.22	5.00e-67	246.00
IUUC-Oru-084434	Oryza rufipogon	49.69	0.00e+00	1174.00
IUUC-Osa-085595	Oryza sativa	56.13	2.00e-84	304.00
IUUC-Ola-086405	Oryzias latipes	24.46	2.00e-37	150.00
IUUC-Oga-088794	Otolemur garnettii	32.69	2.00e-46	180.00
IUUC-Oar-089775	Ovis aries	31.42	2.00e-43	170.00
IUUC-Ptr-090721	Pan troglodytes	39.44	2.00e-22	99.80
IUUC-Pan-092845	Papio anubis	34.81	1.00e-47	185.00
IUUC-Psi-093521	Pelodiscus sinensis	53.02	2.00e-43	168.00
IUUC-Pma-094157	Petromyzon marinus	39.22	4.00e-16	78.20
IUUC-Ppa-095770	Physcomitrella patens	47.78	0.00e+00	1075.00
IUUC-Pfo-097083	Poecilia formosa	30.84	8.00e-47	182.00
IUUC-Pab-098302	Pongo abelii	34.73	3.00e-49	190.00
IUUC-Pop-099033	Populus trichocarpa	66.93	0.00e+00	1709.00
IUUC-Pca-100742	Procavia capensis	38.58	2.00e-45	177.00
IUUC-Ppe-101476	Prunus persica	66.72	0.00e+00	1645.00
IUUC-Pva-103045	Pteropus vampyrus	29.89	5.00e-41	162.00
IUUC-Rno-105433	Rattus norvegicus	34.28	3.00e-49	190.00
IUUC-Sha-107441	Sarcophilus harrisii	53.02	1.00e-46	181.00
IUUC-Smo-109606	Selaginella moellendorffii	47.69	0.00e+00	1043.00
IUUC-Sit-110792	Setaria italica	56.57	0.00e+00	1399.00
IUUC-Sly-110982	Solanum lycopersicum	63.28	0.00e+00	1588.00
IUUC-Stu-112003	Solanum tuberosum	63.44	0.00e+00	1298.00
IUUC-Sar-113146	Sorex araneus	33.80	1.00e-47	184.00
IUUC-Sbi-113941	Sorghum bicolor	51.37	0.00e+00	842.00
IUUC-Ssc-115635	Sus scrofa	34.35	1.00e-48	188.00
IUUC-Tgu-116688	Taeniopygia guttata	52.67	1.00e-45	177.00
IUUC-Tru-118707	Takifugu rubripes	36.62	2.00e-18	87.00
IUUC-Tsy-119023	Tarsius syrichta	27.19	4.00e-26	113.00
IUUC-Tni-120291	Tetraodon nigroviridis	37.32	1.00e-18	87.40
IUUC-Tca-121219	Theobroma cacao	69.48	0.00e+00	1771.00
IUUC-Tbe-127542	Tupaia belangeri	47.06	2.00e-17	84.30
IUUC-Ttr-128241	Tursiops truncatus	33.99	2.00e-48	187.00
IUUC-Vpa-130102	Vicugna pacos	39.44	2.00e-22	99.80
IUUC-Vvi-131629	Vitis vinifera	67.84	0.00e+00	1727.00
IUUC-Xtr-132790	Xenopus tropicalis	29.47	9.00e-50	192.00
IUUC-Xma-133302	Xiphophorus maculatus	30.33	9.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence