iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114160

UUCD1 version

UUC-SoB-00387

Ensembl Protein ID

Sb02g043600.1

UniProt Accession

A0A1B6QGG4; A0A1B6QGG4_SORBI

Genbank Protein ID

KXG37007.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G425300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g043600	Sb02g043600.1	Sb02g043600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-09	36.6	102	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+ +++g  ++ l+C+H+fh+ Cl +w    +    +++CPlCr
   Q: 102  CVFCLSGIEEGseVRELRCQHLFHRACLDRW---VRARPVAATCPLCR 146
           9*******77655999***************...77789999*****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASLRAALLL IPPFSVVVAI MAARCLCRVM ARKLSALACS LQLACLSSGG SSSFRYQLMV 60
SSPSSSVEDI IKGGGGQLPV ALYSRRTTRR RCDGEEEEEE ECVFCLSGIE EGSEVRELRC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGCC TGCGAGCAGC CCTGCTGCTG ATCCCACCCT TCTCCGTGGT GGTGGCCATC 60
ATGGCGGCGC GGTGTCTGTG CCGCGTGATG GCGCGCAAGC TGAGCGCGCT GGCGTGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001171	Aegilops tauschii	74.00	3.00e-17	81.60
IUUC-Ath-007573	Arabidopsis thaliana	35.42	1.00e-12	65.10
IUUC-Hvu-047297	Hordeum vulgare	78.00	1.00e-18	84.30
IUUC-Lpe-050813	Leersia perrieri	75.00	7.00e-12	62.00
IUUC-Mtr-058379	Medicago truncatula	58.33	1.00e-12	64.30
IUUC-Mac-065411	Musa acuminata	73.47	1.00e-15	74.70
IUUC-Oba-075029	Oryza barthii	76.00	2.00e-15	74.70
IUUC-Obr-076270	Oryza brachyantha	60.44	3.00e-18	83.20
IUUC-Ogl-077743	Oryza glaberrima	76.00	2.00e-15	74.70
IUUC-Ogu-078398	Oryza glumaepatula	74.00	8.00e-15	72.40
IUUC-Oin-079458	Oryza indica	76.00	2.00e-15	74.70
IUUC-Ome-081478	Oryza meridionalis	76.00	2.00e-15	73.90
IUUC-Oni-082518	Oryza nivara	76.00	2.00e-15	74.30
IUUC-Opu-083734	Oryza punctata	79.59	9.00e-18	82.00
IUUC-Oru-084590	Oryza rufipogon	76.00	2.00e-15	73.90
IUUC-Osa-085480	Oryza sativa	78.00	3.00e-16	77.00
IUUC-Sit-110050	Setaria italica	53.70	3.00e-14	70.50
IUUC-Tae-125109	Triticum aestivum	71.43	2.00e-15	74.30
IUUC-Vvi-131453	Vitis vinifera	43.01	5.00e-15	72.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence