iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110064

Ensembl Protein ID

Si013357m

UniProt Accession

K3YGI9; K3YGI9_SETIT

Genbank Protein ID

KQL00193.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003533

Gene Name

LOC101754375; SETIT_013357mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si013357m.g	Si013357m	Si013357m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.30e-19	69.8	427	473

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C+ Cg++ ++e   + C++C+ +fH+ Clk++  +++p +  w+Cp C++
   Q: 427  ICKDCGRKADSE-GRIICDRCEAAFHVSCLKPA-IDDVPAK--WFCPTCNE 473
           577788887765.7999****************.99*****..******96 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MVRHYGRKKR REVLGGGWRF SLPPLLQFGL TLGSPAPLSS IPRLPSSPAC APPPLPRLAA 60
RDLQNSPQTL TPLPPPPRAP SPLFLLALPI PISPPFLGPG ACSSLPPRMA SDGAASRRPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTACGGC ACTATGGCAG GAAGAAGAGG AGAGAGGTTT TGGGTGGGGG ATGGCGGTTT 60
TCCCTTCCCC CGCTCCTCCA ATTTGGACTG ACGCTCGGTT CTCCCGCACC ACTTTCATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0048586--P:regulation of long-day photoperiodism, flowering

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000842	Aegilops tauschii	53.21	9.00e-132	462.00
IUUC-Atr-003036	Amborella trichopoda	32.29	1.00e-43	171.00
IUUC-Aly-005677	Arabidopsis lyrata	32.45	1.00e-54	207.00
IUUC-Ath-007282	Arabidopsis thaliana	32.60	6.00e-55	207.00
IUUC-Bdi-014741	Brachypodium distachyon	52.15	2.00e-155	541.00
IUUC-Bol-016121	Brassica oleracea	33.42	3.00e-50	192.00
IUUC-Bra-018006	Brassica rapa	34.19	5.00e-54	204.00
IUUC-Cin-025168	Ciona intestinalis	41.10	2.00e-11	61.60
IUUC-Ete-032572	Echinops telfairi	36.71	8.00e-11	64.70
IUUC-Hvu-047140	Hordeum vulgare	53.36	1.00e-155	542.00
IUUC-Lpe-051590	Leersia perrieri	49.28	3.00e-131	462.00
IUUC-Mtr-058493	Medicago truncatula	32.24	3.00e-59	222.00
IUUC-Mac-065361	Musa acuminata	39.62	3.00e-86	311.00
IUUC-Oba-075978	Oryza barthii	54.53	4.00e-151	527.00
IUUC-Obr-076162	Oryza brachyantha	55.06	2.00e-142	498.00
IUUC-Ogu-078286	Oryza glumaepatula	54.53	2.00e-151	528.00
IUUC-Oin-079536	Oryza indica	53.60	1.00e-151	528.00
IUUC-Olo-081087	Oryza longistaminata	54.95	8.00e-154	537.00
IUUC-Ome-081892	Oryza meridionalis	54.03	2.00e-153	535.00
IUUC-Oni-082124	Oryza nivara	54.53	5.00e-151	527.00
IUUC-Opu-084017	Oryza punctata	52.66	5.00e-146	511.00
IUUC-Oru-084542	Oryza rufipogon	53.60	7.00e-152	530.00
IUUC-Osa-086025	Oryza sativa	53.60	7.00e-152	530.00
IUUC-Pop-099385	Populus trichocarpa	30.74	3.00e-63	235.00
IUUC-Ppe-101709	Prunus persica	33.33	2.00e-71	262.00
IUUC-Sly-111296	Solanum lycopersicum	32.07	1.00e-59	223.00
IUUC-Sbi-113816	Sorghum bicolor	72.30	0.00e+00	687.00
IUUC-Tca-120988	Theobroma cacao	33.81	3.00e-70	258.00
IUUC-Tae-124000	Triticum aestivum	53.18	1.00e-157	549.00
IUUC-Tur-126151	Triticum urartu	52.98	3.00e-132	464.00
IUUC-Vvi-130984	Vitis vinifera	31.69	3.00e-62	232.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence