iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126151

Ensembl Protein ID

TRIUR3_24956-P1

UniProt Accession

M7Z2F1; M7Z2F1_TRIUA

Genbank Protein ID

EMS53651.1

Protein Name

Methyl-CpG-binding domain-containing protein 9

Genbank Nucleotide ID

KD191971

Gene Name

TRIUR3_24956

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_24956	TRIUR3_24956-T1	TRIUR3_24956-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.00e-16	59.3	480	525

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C  C+++++de +++ C+ C+e++H+ C+ ++  +++p+ + w+Cp C+
   Q: 480  CRGCFKNKDDE-EITLCDGCDEAYHVYCMTPK-RTCVPKGH-WYCPLCS 525
           88899999977.6*******************.*******8.******7 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEEAAVLDPA QPQRESSRPG GSWRGGDNGS MDDVVPLPLS LHADGRRNRR DDSDWSDDAW 60
KTSAGSLVPP PSPVAVLLAK MATRSCPDIG LLGGTRWRAS CNPQGNLNKG QGASEEHPAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGG CGGCCGTCCT TGATCCGGCG CAACCGCAAC GAGAGAGTTC ACGGCCCGGC 60
GGAAGTTGGC GCGGCGGCGA CAATGGCTCC ATGGACGACG TGGTTCCCCT GCCGCTTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0048586--P:regulation of long-day photoperiodism, flowering

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000842	Aegilops tauschii	97.15	0.00e+00	929.00
IUUC-Atr-003036	Amborella trichopoda	31.14	3.00e-40	159.00
IUUC-Aly-005677	Arabidopsis lyrata	31.31	3.00e-53	202.00
IUUC-Ath-007282	Arabidopsis thaliana	31.14	3.00e-52	198.00
IUUC-Ame-010612	Astyanax mexicanus	34.62	2.00e-10	62.80
IUUC-Bdi-014741	Brachypodium distachyon	76.52	0.00e+00	691.00
IUUC-Bol-016121	Brassica oleracea	31.63	1.00e-48	186.00
IUUC-Bra-018006	Brassica rapa	31.63	2.00e-51	195.00
IUUC-Gma-044138	Glycine max	31.04	7.00e-60	224.00
IUUC-Hvu-047140	Hordeum vulgare	94.08	0.00e+00	807.00
IUUC-Lpe-051590	Leersia perrieri	60.76	5.00e-139	487.00
IUUC-Mtr-058493	Medicago truncatula	27.98	3.00e-49	189.00
IUUC-Mac-065361	Musa acuminata	45.91	5.00e-91	327.00
IUUC-Oba-075978	Oryza barthii	62.70	2.00e-155	541.00
IUUC-Obr-076162	Oryza brachyantha	62.73	5.00e-158	550.00
IUUC-Ogu-078286	Oryza glumaepatula	62.25	3.00e-154	537.00
IUUC-Oin-079536	Oryza indica	62.47	1.00e-154	539.00
IUUC-Olo-081087	Oryza longistaminata	61.47	5.00e-155	540.00
IUUC-Ome-081892	Oryza meridionalis	60.26	4.00e-154	537.00
IUUC-Oni-082124	Oryza nivara	62.25	2.00e-154	538.00
IUUC-Opu-084017	Oryza punctata	61.64	2.00e-158	551.00
IUUC-Oru-084542	Oryza rufipogon	62.41	5.00e-154	536.00
IUUC-Osa-086025	Oryza sativa	62.41	5.00e-154	536.00
IUUC-Pop-099385	Populus trichocarpa	33.83	3.00e-55	208.00
IUUC-Ppe-101709	Prunus persica	31.92	2.00e-62	232.00
IUUC-Sit-110064	Setaria italica	53.40	7.00e-138	483.00
IUUC-Sly-111296	Solanum lycopersicum	33.09	5.00e-60	224.00
IUUC-Sbi-113816	Sorghum bicolor	52.85	8.00e-117	414.00
IUUC-Tca-120988	Theobroma cacao	33.03	2.00e-65	242.00
IUUC-Tae-125406	Triticum aestivum	99.78	0.00e+00	865.00
IUUC-Vvi-130984	Vitis vinifera	30.94	3.00e-64	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence