iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007441

UUCD1 version

UUC-ArT-01373

Ensembl Protein ID

AT2G18650.1

UniProt Accession

Q9ZV53; ATL49_ARATH

Genbank Protein ID

AAD08934.1; AEC06789.1

Protein Name

Putative RING-H2 finger protein ATL49; Protein MATERNAL EFFECT EMBRYO ARREST 16; RING-type E3 ubiquitin transferase ATL49

Genbank Nucleotide ID

AC005724; CP002685

Gene Name

ATL49; MEE16; At2g18650; MSF3.3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G18650	AT2G18650.1	AT2G18650.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	29.5	126	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  +d +++lp C H+fh +C+  w         + +CPlCr
   Q: 126  CPVCLCEFetEDKLRLLPkCSHAFHVECIDTW------LLSHSTCPLCR 168
           ********77555999****************......89999*****8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May be involved in female gametophyte development.

Protein Sequence
(Fasta)

MNKILPEMKS TQNLISSSPP PPLIPLKSNT SLSNLNSKIT PNILLIIIIL SIIFFISGLL 60
HILVKFLLTP SRESREDYFD NVTALQGQLQ QLFNLHDSGV DQSLIDTLPV FHYKSIVGLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTAATCATC ACTCTATCTC ATAAATTTTC AAAAAACTTT GAGCTCAAAT CTTTATTTCT 60
CTTCTTTCAA TTACAAGATA AACCAAAACT CTCAGAAAAC AGAGCATGCA TTAATAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009793--P:embryo development ending in seed dormancy
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G18650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005920	Arabidopsis lyrata	88.56	5.00e-155	540.00
IUUC-Bol-016576	Brassica oleracea	71.92	6.00e-131	459.00
IUUC-Bra-017748	Brassica rapa	69.95	8.00e-129	452.00
IUUC-Hvu-047392	Hordeum vulgare	42.60	4.00e-50	191.00
IUUC-Lpe-051680	Leersia perrieri	45.85	2.00e-54	206.00
IUUC-Mvi-060468	Microbotryum violaceum	64.58	1.00e-12	67.80
IUUC-Oba-075403	Oryza barthii	44.99	5.00e-55	207.00
IUUC-Obr-076503	Oryza brachyantha	44.79	6.00e-49	187.00
IUUC-Ogl-077574	Oryza glaberrima	45.56	8.00e-55	207.00
IUUC-Ogu-077986	Oryza glumaepatula	45.56	8.00e-55	207.00
IUUC-Oin-079091	Oryza indica	46.86	3.00e-55	209.00
IUUC-Ome-082001	Oryza meridionalis	39.15	1.00e-51	196.00
IUUC-Oni-082260	Oryza nivara	46.00	7.00e-55	207.00
IUUC-Opu-083578	Oryza punctata	45.82	1.00e-54	206.00
IUUC-Oru-084794	Oryza rufipogon	45.56	8.00e-55	207.00
IUUC-Osa-085348	Oryza sativa	45.56	8.00e-55	207.00
IUUC-Ppa-095806	Physcomitrella patens	62.50	6.00e-35	141.00
IUUC-Pgr-103263	Puccinia graminis	46.38	4.00e-12	66.20
IUUC-Stu-112868	Solanum tuberosum	46.76	6.00e-79	287.00
IUUC-Sbi-114154	Sorghum bicolor	35.28	5.00e-43	167.00
IUUC-Tae-123223	Triticum aestivum	39.46	3.00e-46	178.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence