iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-085100

Ensembl Protein ID

ORUFI08G23770.1

UniProt Accession

A0A0E0QLI3; A0A0E0QLI3_ORYRU

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI08G23770	ORUFI08G23770.1	ORUFI08G23770.1
ORUFI08G23770	ORUFI08G23770.2	ORUFI08G23770.2
ORUFI08G23770	ORUFI08G23770.3	ORUFI08G23770.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.60e-112	377.2	1558	2079

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqq 90
           tG+ NlgNtCY+N++LQcL+ + +lr  +l           p  p+g l + l++lf      ++ ++  +p +ll++++   ++f+g + q
   Q: 1558 TGMPNLGNTCYLNALLQCLLVLGKLRARILG----------PGAPSGVLGDFLHDLFVGTNgpSYARRLLDPAMLLRCVRFRYPQFRGIAMQ 1639
           79*****************************..........5678999*********999999***************************** PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeet 182
           D++E+l++l d+l+e+    ++++             ++++  +    +++i+ +F gql+ ++ c+ c  +s +ee f dls+p+p k + 
   Q: 1640 DCHELLCCLRDGLDEDE---RKWRA-----------GKMQQGAPSAVAPTVIDSIFAGQLSVTLSCKCCSFKSDSEEVFHDLSMPLPPKGTP 1717
           *****************...23333...........344566799999*****************************************988 PP
   S: 183  kke......................................................................................... 185
           + +                                                                                         
   Q: 1718 ARSvaspprngrcisqqktrmelfpainktntekihaiseggdaqvpasesehmvmvktseplevdsnhleqisqskgdvhgplqaptreen 1809
           8889**************************************************************************************** PP
   S: 186  ..............................................................slqdcLesftkeeelegenkyycekck... 212
                                                                         s++++Le   k+e++e+     ce+c    
   Q: 1810 tliasghgvertvsavldsikpedsieakmdtlsaevatedkgkdrnrdavydkaddinslaSIEEILELHLKAEMIEK----RCENCSnad 1897
           ******************************************************************************5....899999777 PP
   S: 213  ...............................................kkqe............aekklklkklPevLilhLkRfsfseeqks 245
                                                             e            a k++ ++klP+vL lhLkR  +      
   Q: 1898 qkaspisgkhgeqpvactnvngtvdgdqdeqdqgrgkqvnmghsahqV--EenqydrpdrnkgAIKTCLFSKLPPVLALHLKRNLWP----L 1983
           777777777777777777777777777766666666666666655550..0555666666666*********************774....5 PP
   S: 246  rekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvkn.....ekgk....WllfdDskVtevkeeevleetg 327
           + k++ +v+f+++Ld++ f++ ++ ++k++ +Y+L++vv H G  ++ GH+vayv+      +  +    W++ +D  ++ev+ eevl+   
   Q: 1984 KLKVSGHVSFKETLDVKLFMHPSS-EDKDNSSYRLVGVVEHLGlCMDAGHFVAYVRPscpqqT--NgsslWFCASDADIREVSLEEVLK--- 2069
           589**************9999855.5567****************************666542..14689*******************... PP
   S: 328  staYvlfYkr 337
           ++aY+lfY+r
   Q: 2070 CEAYLLFYER 2079
           ********98 PP

Organism

Oryza rufipogon

Protein Sequence
(Fasta)

MDEKARAGKS PRLKRRSSGS DPLEEAAGLT SDSSSIRRCR HVSCDQATID LGIALIKASI 60
DGPACDSFKC GTTEERGILV CLDCGSSLCA LHARWHARMN RHWVALMHKR PNVAYCFSCE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAGA AAGCGAGGGC CGGGAAATCC CCACGCCTGA AGCGGCGCTC TTCTGGAAGC 60
GATCCGTTGG AGGAAGCGGC GGGGTTAACC AGCGACAGTA GTAGTATTCG GCGGTGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020846--MFS_dom
IPR001394--Peptidase_C19_UCH
IPR000109--POT_fam
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00854--PTR2
PF00443--UCH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0005215--F:transporter activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051417	Leersia perrieri	60.48	0.00e+00	758.00
IUUC-Obr-076351	Oryza brachyantha	62.48	0.00e+00	803.00
IUUC-Ogl-077545	Oryza glaberrima	98.74	0.00e+00	1342.00
IUUC-Ogu-078115	Oryza glumaepatula	90.05	0.00e+00	2021.00
IUUC-Oin-079987	Oryza indica	98.74	0.00e+00	1344.00
IUUC-Olo-080614	Oryza longistaminata	97.34	0.00e+00	1290.00
IUUC-Oni-082972	Oryza nivara	98.46	0.00e+00	1338.00
IUUC-Osa-085905	Oryza sativa	99.58	0.00e+00	1354.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence