iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++   +l+s++dD+++k WD+r
   Q: 226  HGQLVRDLDFnPNkqYYLASCGDDCKVKFWDTR 258
           8999*******555899**************86 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHIIDFDD ENNIINKNVL 60
LHQAGEIWHI SASPADKGVL ATCYNKTSDS RVQACAAVWR MPKELESGSH ESPEDPASTA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTTCTGGC CGATCCCTGG TGAGGCGGGA CTCGGGCTCT AAGGCTTGAG TAGTTCGGCA 60
GGCAGAGTAT CATGGAAGAC GACGCCCCGG TGATCTACGG GCTGGAATTT CAGGTGAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	35.66	2.00e-42	166.00
IUUC-Aml-002348	Ailuropoda melanoleuca	90.73	2.00e-122	431.00
IUUC-Atr-003028	Amborella trichopoda	32.78	9.00e-52	197.00
IUUC-Apl-004211	Anas platyrhynchos	80.72	9.00e-176	609.00
IUUC-Aca-004893	Anolis carolinensis	88.63	0.00e+00	655.00
IUUC-Aly-005975	Arabidopsis lyrata	33.70	5.00e-52	197.00
IUUC-Ath-007527	Arabidopsis thaliana	33.97	1.00e-54	206.00
IUUC-Ame-010619	Astyanax mexicanus	85.79	0.00e+00	647.00
IUUC-Bta-013035	Bos taurus	87.34	0.00e+00	675.00
IUUC-Bdi-014619	Brachypodium distachyon	34.04	1.00e-54	206.00
IUUC-Bol-016581	Brassica oleracea	32.97	5.00e-52	197.00
IUUC-Bra-017885	Brassica rapa	32.79	2.00e-52	199.00
IUUC-Cel-018344	Caenorhabditis elegans	34.30	3.00e-55	208.00
IUUC-Cja-018975	Callithrix jacchus	85.99	0.00e+00	677.00
IUUC-Cfa-020214	Canis familiaris	89.66	0.00e+00	652.00
IUUC-Cpo-021363	Cavia porcellus	91.47	0.00e+00	645.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	25.53	6.00e-32	131.00
IUUC-Csa-023240	Chlorocebus sabaeus	93.28	0.00e+00	660.00
IUUC-Cho-024713	Choloepus hoffmanni	85.27	9.00e-176	609.00
IUUC-Cin-025678	Ciona intestinalis	47.03	3.00e-104	371.00
IUUC-Csv-026022	Ciona savignyi	46.94	3.00e-102	364.00
IUUC-Dre-027817	Danio rerio	83.46	0.00e+00	669.00
IUUC-Dno-030097	Dasypus novemcinctus	93.02	0.00e+00	663.00
IUUC-Dme-031866	Drosophila melanogaster	38.68	2.00e-72	266.00
IUUC-Ete-032575	Echinops telfairi	79.33	2.00e-133	468.00
IUUC-Eca-034323	Equus caballus	90.48	1.00e-139	488.00
IUUC-Eeu-035217	Erinaceus europaeus	70.98	4.00e-139	487.00
IUUC-Fca-035709	Felis catus	90.27	1.00e-166	578.00
IUUC-Fal-036989	Ficedula albicollis	88.11	0.00e+00	644.00
IUUC-Gmo-038623	Gadus morhua	72.42	4.00e-155	540.00
IUUC-Gga-040157	Gallus gallus	88.37	0.00e+00	650.00
IUUC-Gac-041368	Gasterosteus aculeatus	61.62	6.00e-111	393.00
IUUC-Gma-044196	Glycine max	32.07	6.00e-51	194.00
IUUC-Ggo-044513	Gorilla gorilla	87.38	0.00e+00	645.00
IUUC-Hsa-046844	Homo sapiens	86.96	0.00e+00	646.00
IUUC-Hvu-047435	Hordeum vulgare	35.37	4.00e-56	211.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	94.06	1.00e-151	528.00
IUUC-Lch-049696	Latimeria chalumnae	86.82	0.00e+00	647.00
IUUC-Lpe-050988	Leersia perrieri	34.92	2.00e-42	165.00
IUUC-Loc-052440	Lepisosteus oculatus	86.08	0.00e+00	642.00
IUUC-Laf-054088	Loxodonta africana	91.71	0.00e+00	654.00
IUUC-Mcc-055575	Macaca mulatta	85.44	3.00e-179	620.00
IUUC-Meu-056807	Macropus eugenii	66.43	2.00e-135	475.00
IUUC-Mtr-058599	Medicago truncatula	32.97	1.00e-52	200.00
IUUC-Mga-059336	Meleagris gallopavo	85.79	2.00e-176	611.00
IUUC-Mmr-061706	Microcebus murinus	93.02	0.00e+00	665.00
IUUC-Mdo-062736	Monodelphis domestica	88.89	2.00e-180	625.00
IUUC-Mmu-064265	Mus musculus	97.41	0.00e+00	744.00
IUUC-Mac-065342	Musa acuminata	33.24	4.00e-51	195.00
IUUC-Mpu-066514	Mustela putorius furo	89.15	0.00e+00	680.00
IUUC-Mlu-067072	Myotis lucifugus	88.83	4.00e-104	370.00
IUUC-Nle-069307	Nomascus leucogenys	83.82	4.00e-176	610.00
IUUC-Opr-070283	Ochotona princeps	71.83	2.00e-142	498.00
IUUC-Ont-072532	Oreochromis niloticus	81.14	8.00e-174	602.00
IUUC-Oan-073222	Ornithorhynchus anatinus	87.54	2.00e-177	614.00
IUUC-Oba-075849	Oryza barthii	36.01	4.00e-43	169.00
IUUC-Obr-076488	Oryza brachyantha	33.62	2.00e-47	182.00
IUUC-Ogl-077928	Oryza glaberrima	36.27	1.00e-45	177.00
IUUC-Ogu-077997	Oryza glumaepatula	33.43	3.00e-43	169.00
IUUC-Oin-079848	Oryza indica	36.27	3.00e-45	176.00
IUUC-Oni-082492	Oryza nivara	36.01	4.00e-43	169.00
IUUC-Oru-085119	Oryza rufipogon	36.01	3.00e-43	169.00
IUUC-Osa-086152	Oryza sativa	36.27	8.00e-46	177.00
IUUC-Ola-086694	Oryzias latipes	73.03	2.00e-172	598.00
IUUC-Olu-087749	Ostreococcus lucimarinus	33.33	3.00e-24	104.00
IUUC-Oga-088180	Otolemur garnettii	90.67	2.00e-140	491.00
IUUC-Oar-089621	Ovis aries	70.11	8.00e-135	473.00
IUUC-Ptr-091053	Pan troglodytes	88.37	0.00e+00	639.00
IUUC-Pan-091918	Papio anubis	92.76	0.00e+00	656.00
IUUC-Psi-093545	Pelodiscus sinensis	88.86	0.00e+00	647.00
IUUC-Pma-094439	Petromyzon marinus	72.01	2.00e-161	561.00
IUUC-Pfo-096127	Poecilia formosa	83.46	0.00e+00	631.00
IUUC-Pab-097916	Pongo abelii	83.82	0.00e+00	632.00
IUUC-Pop-098864	Populus trichocarpa	33.51	4.00e-52	198.00
IUUC-Pca-100797	Procavia capensis	78.15	8.00e-115	407.00
IUUC-Ppe-101796	Prunus persica	33.42	2.00e-54	206.00
IUUC-Pva-103228	Pteropus vampyrus	80.92	8.00e-179	619.00
IUUC-Sha-106940	Sarcophilus harrisii	88.66	0.00e+00	660.00
IUUC-Smo-109355	Selaginella moellendorffii	33.60	6.00e-59	221.00
IUUC-Sit-109958	Setaria italica	35.41	5.00e-55	208.00
IUUC-Sly-111871	Solanum lycopersicum	31.35	2.00e-50	192.00
IUUC-Stu-112128	Solanum tuberosum	31.06	4.00e-48	184.00
IUUC-Sar-113084	Sorex araneus	73.57	2.00e-108	385.00
IUUC-Sbi-114122	Sorghum bicolor	35.11	2.00e-54	206.00
IUUC-Ssc-115385	Sus scrofa	86.30	0.00e+00	632.00
IUUC-Tgu-117090	Taeniopygia guttata	86.33	5.00e-178	616.00
IUUC-Tru-118548	Takifugu rubripes	73.75	4.00e-173	600.00
IUUC-Tsy-119435	Tarsius syrichta	86.71	1.00e-179	622.00
IUUC-Tni-120311	Tetraodon nigroviridis	70.95	4.00e-148	517.00
IUUC-Tca-121141	Theobroma cacao	32.61	2.00e-49	189.00
IUUC-Tae-122717	Triticum aestivum	35.37	4.00e-56	211.00
IUUC-Tbe-127623	Tupaia belangeri	65.15	6.00e-110	390.00
IUUC-Ttr-128706	Tursiops truncatus	87.91	2.00e-125	441.00
IUUC-Vvi-130871	Vitis vinifera	33.60	7.00e-49	187.00
IUUC-Xtr-131950	Xenopus tropicalis	83.20	0.00e+00	634.00
IUUC-Xma-133364	Xiphophorus maculatus	82.95	1.00e-180	625.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence