iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104500

Ensembl Protein ID

EDU44441

UniProt Accession

B2WND4; B2WND4_PYRTR

Genbank Protein ID

EDU44441.1

Protein Name

THO complex subunit 3

Genbank Nucleotide ID

DS231631

Gene Name

PTRG_11391

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_11391	EDU44441	EDU44441

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-20	69.5	40	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sdtllvsGsdDgtikvWDl 30
             ++++++  s+t++++G+ D+t+++W++
   Q: 40   HYIRSISWnaSGTFIATGAADKTLRIWNP 68
           579******877***************96 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MAPPVRVGSI KKESFAKRFL DFKTSVYQDS LRPASVSSSH YIRSISWNAS GTFIATGAAD 60
KTLRIWNPEK TNVKNSTELR TPGASAGSSL ERVAFHPINE NELASCGTDG MVRFWDIRTK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCTC CTGTCCGCGT CGGTTCTATC AAAAAGGAAA GCTTCGCAAA GAGGTTCCTG 60
GACTTTAAAA CGTCGGTATA CCAGGACAGC TTGCGCCCGG CCTCGGTCTC ATCGTCACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR016040--NAD(P)-bd_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR002347--SDR_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00106--adh_short
PF00400--WD40

PRINTS

PR00081--GDHRDH
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	32.13	5.00e-38	149.00
IUUC-Aml-001264	Ailuropoda melanoleuca	31.08	3.00e-39	153.00
IUUC-Atr-003050	Amborella trichopoda	32.91	2.00e-40	157.00
IUUC-Apl-003426	Anas platyrhynchos	32.86	2.00e-27	113.00
IUUC-Aca-004931	Anolis carolinensis	34.59	7.00e-28	115.00
IUUC-Aly-006237	Arabidopsis lyrata	32.26	3.00e-41	160.00
IUUC-Ath-007581	Arabidopsis thaliana	32.66	1.00e-41	161.00
IUUC-Acl-008253	Aspergillus clavatus	42.81	7.00e-69	252.00
IUUC-Afl-008519	Aspergillus flavus	46.82	3.00e-71	259.00
IUUC-Afu-008886	Aspergillus fumigatus	40.90	4.00e-67	246.00
IUUC-Ani-009275	Aspergillus nidulans	44.65	3.00e-70	257.00
IUUC-Ang-009862	Aspergillus niger	46.51	5.00e-64	236.00
IUUC-Aor-010164	Aspergillus oryzae	52.35	6.00e-39	151.00
IUUC-Ate-010247	Aspergillus terreus	42.77	1.00e-69	254.00
IUUC-Ame-010828	Astyanax mexicanus	31.08	3.00e-39	154.00
IUUC-Bgr-012163	Blumeria graminis	43.16	2.00e-61	227.00
IUUC-Bta-013514	Bos taurus	30.43	6.00e-34	136.00
IUUC-Bci-013639	Botrytis cinerea	43.67	4.00e-70	256.00
IUUC-Bdi-015049	Brachypodium distachyon	30.47	3.00e-35	140.00
IUUC-Bol-015401	Brassica oleracea	31.78	1.00e-37	148.00
IUUC-Bra-017867	Brassica rapa	31.76	2.00e-37	147.00
IUUC-Cel-018699	Caenorhabditis elegans	29.08	9.00e-21	92.40
IUUC-Cja-019591	Callithrix jacchus	31.13	1.00e-39	155.00
IUUC-Cfa-020692	Canis familiaris	31.08	3.00e-39	154.00
IUUC-Cpo-022135	Cavia porcellus	29.48	3.00e-31	127.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	30.20	1.00e-24	105.00
IUUC-Csa-023408	Chlorocebus sabaeus	30.74	3.00e-39	154.00
IUUC-Cho-024340	Choloepus hoffmanni	33.53	2.00e-28	117.00
IUUC-Csv-026130	Ciona savignyi	28.63	1.00e-33	134.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	44.64	8.00e-65	238.00
IUUC-Cne-026775	Cryptococcus neoformans	34.34	1.00e-12	66.20
IUUC-Dre-028634	Danio rerio	30.68	4.00e-39	153.00
IUUC-Dno-029449	Dasypus novemcinctus	31.08	3.00e-39	153.00
IUUC-Dor-030301	Dipodomys ordii	33.55	2.00e-26	110.00
IUUC-Dse-031341	Dothistroma septosporum	39.33	2.00e-57	214.00
IUUC-Dme-031674	Drosophila melanogaster	31.50	4.00e-37	146.00
IUUC-Ete-033136	Echinops telfairi	30.68	3.00e-39	153.00
IUUC-Eca-034432	Equus caballus	32.52	9.00e-35	139.00
IUUC-Fca-035694	Felis catus	31.08	3.00e-39	154.00
IUUC-Fal-037328	Ficedula albicollis	31.08	2.00e-39	154.00
IUUC-Fox-037894	Fusarium oxysporum	40.88	7.00e-67	245.00
IUUC-Fso-038266	Fusarium solani	38.58	2.00e-63	233.00
IUUC-Gmo-039617	Gadus morhua	30.74	3.00e-39	153.00
IUUC-Ggr-039819	Gaeumannomyces graminis	38.69	3.00e-55	206.00
IUUC-Gga-041164	Gallus gallus	31.08	3.00e-39	154.00
IUUC-Gac-042407	Gasterosteus aculeatus	30.77	6.00e-39	152.00
IUUC-Gma-043663	Glycine max	31.45	4.00e-39	153.00
IUUC-Ggo-044989	Gorilla gorilla	30.74	3.00e-39	154.00
IUUC-Hsa-046784	Homo sapiens	30.74	2.00e-39	154.00
IUUC-Hvu-047633	Hordeum vulgare	34.76	2.00e-27	114.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	24.20	1.00e-16	79.00
IUUC-Lch-049894	Latimeria chalumnae	31.08	6.00e-40	155.00
IUUC-Lpe-051061	Leersia perrieri	25.23	2.00e-19	88.20
IUUC-Loc-052424	Lepisosteus oculatus	29.24	4.00e-40	156.00
IUUC-Lma-053127	Leptosphaeria maculans	83.39	2.00e-147	514.00
IUUC-Laf-053396	Loxodonta africana	31.08	3.00e-39	153.00
IUUC-Mcc-055517	Macaca mulatta	30.74	3.00e-39	154.00
IUUC-Meu-056034	Macropus eugenii	31.08	1.00e-39	154.00
IUUC-Mor-057011	Magnaporthe oryzae	37.88	5.00e-37	146.00
IUUC-Mpo-057490	Magnaporthe poae	39.05	1.00e-55	208.00
IUUC-Mtr-057927	Medicago truncatula	30.24	3.00e-36	143.00
IUUC-Mla-058945	Melampsora laricipopulina	30.71	1.00e-28	118.00
IUUC-Mga-060155	Meleagris gallopavo	31.33	4.00e-39	152.00
IUUC-Mvi-060344	Microbotryum violaceum	30.04	2.00e-33	134.00
IUUC-Mmr-060834	Microcebus murinus	31.08	2.00e-39	154.00
IUUC-Mdo-062587	Monodelphis domestica	31.08	8.00e-40	155.00
IUUC-Mmu-063395	Mus musculus	31.08	3.00e-39	153.00
IUUC-Mac-064579	Musa acuminata	31.05	3.00e-39	153.00
IUUC-Mpu-066688	Mustela putorius furo	30.42	4.00e-40	156.00
IUUC-Mlu-067299	Myotis lucifugus	31.08	1.00e-39	154.00
IUUC-Nfi-068562	Neosartorya fischeri	41.59	8.00e-68	248.00
IUUC-Ncr-068654	Neurospora crassa	42.12	1.00e-63	234.00
IUUC-Nle-069736	Nomascus leucogenys	31.10	4.00e-40	156.00
IUUC-Ont-071763	Oreochromis niloticus	30.77	2.00e-39	154.00
IUUC-Ocu-074909	Oryctolagus cuniculus	31.08	2.00e-39	154.00
IUUC-Oba-075902	Oryza barthii	26.03	9.00e-21	92.40
IUUC-Obr-076613	Oryza brachyantha	30.98	2.00e-32	130.00
IUUC-Ogl-077009	Oryza glaberrima	29.64	2.00e-32	131.00
IUUC-Ogu-078344	Oryza glumaepatula	26.03	9.00e-21	92.40
IUUC-Oin-079773	Oryza indica	29.64	2.00e-32	131.00
IUUC-Olo-080474	Oryza longistaminata	26.88	8.00e-20	88.20
IUUC-Oni-082263	Oryza nivara	26.03	9.00e-21	92.40
IUUC-Opu-083813	Oryza punctata	29.64	3.00e-32	130.00
IUUC-Oru-084610	Oryza rufipogon	26.03	8.00e-21	92.40
IUUC-Osa-085415	Oryza sativa	29.25	6.00e-32	129.00
IUUC-Ola-086659	Oryzias latipes	31.11	4.00e-40	156.00
IUUC-Olu-087649	Ostreococcus lucimarinus	27.05	5.00e-25	106.00
IUUC-Oga-087923	Otolemur garnettii	31.08	2.00e-39	154.00
IUUC-Oar-089688	Ovis aries	30.28	5.00e-39	153.00
IUUC-Ptr-091628	Pan troglodytes	30.74	2.00e-39	154.00
IUUC-Pan-092586	Papio anubis	31.03	3.00e-38	150.00
IUUC-Psi-093701	Pelodiscus sinensis	34.59	2.00e-27	113.00
IUUC-Pma-094465	Petromyzon marinus	29.88	7.00e-38	149.00
IUUC-Pno-094767	Phaeosphaeria nodorum	62.50	0.00e+00	639.00
IUUC-Ppa-095195	Physcomitrella patens	33.58	4.00e-45	173.00
IUUC-Pfo-097383	Poecilia formosa	31.15	3.00e-39	154.00
IUUC-Pab-098669	Pongo abelii	30.74	3.00e-39	154.00
IUUC-Pop-099409	Populus trichocarpa	30.24	6.00e-38	149.00
IUUC-Pca-100769	Procavia capensis	28.69	3.00e-28	117.00
IUUC-Ppe-101321	Prunus persica	31.05	3.00e-38	150.00
IUUC-Pva-102759	Pteropus vampyrus	31.08	2.00e-39	154.00
IUUC-Pgr-103535	Puccinia graminis	31.76	2.00e-29	121.00
IUUC-Ptt-103820	Puccinia triticina	31.76	1.00e-29	122.00
IUUC-Pte-104271	Pyrenophora teres	94.81	1.00e-158	550.00
IUUC-Rno-106126	Rattus norvegicus	31.08	3.00e-39	154.00
IUUC-Sha-107146	Sarcophilus harrisii	31.33	5.00e-39	152.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	37.18	3.00e-50	190.00
IUUC-Spo-108324	Schizosaccharomyces pombe	30.77	7.00e-37	145.00
IUUC-Smo-109360	Selaginella moellendorffii	33.59	2.00e-40	157.00
IUUC-Sit-110773	Setaria italica	30.52	9.00e-35	138.00
IUUC-Sly-111619	Solanum lycopersicum	32.66	2.00e-40	157.00
IUUC-Stu-112241	Solanum tuberosum	33.06	4.00e-41	159.00
IUUC-Sbi-114842	Sorghum bicolor	29.84	3.00e-34	137.00
IUUC-Sre-115070	Sporisorium reilianum	25.65	5.00e-21	93.60
IUUC-Ssc-115581	Sus scrofa	31.08	3.00e-39	154.00
IUUC-Tgu-117354	Taeniopygia guttata	30.28	3.00e-37	147.00
IUUC-Tru-117745	Takifugu rubripes	30.38	1.00e-38	151.00
IUUC-Tni-120050	Tetraodon nigroviridis	30.68	3.00e-39	153.00
IUUC-Tca-121279	Theobroma cacao	31.85	5.00e-40	155.00
IUUC-Tre-121952	Trichoderma reesei	42.38	5.00e-65	239.00
IUUC-Tvi-122581	Trichoderma virens	42.05	9.00e-65	238.00
IUUC-Tae-123910	Triticum aestivum	32.13	6.00e-38	149.00
IUUC-Tur-126279	Triticum urartu	31.15	1.00e-36	145.00
IUUC-Tme-127000	Tuber melanosporum	36.07	9.00e-48	181.00
IUUC-Ttr-128405	Tursiops truncatus	32.52	4.00e-35	139.00
IUUC-Uma-129547	Ustilago maydis	24.73	1.00e-21	95.90
IUUC-Vda-129689	Verticillium dahliae	40.00	1.00e-52	198.00
IUUC-Vvi-131345	Vitis vinifera	31.85	2.00e-39	154.00
IUUC-Xtr-132136	Xenopus tropicalis	30.65	1.00e-40	158.00
IUUC-Xma-133767	Xiphophorus maculatus	31.15	3.00e-39	153.00
IUUC-Yli-134522	Yarrowia lipolytica	26.62	9.00e-26	109.00
IUUC-Zma-135816	Zea mays	30.92	2.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence