iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058647

Ensembl Protein ID

KEH35049

UniProt Accession

A0A072UZ24; A0A072UZ24_MEDTR

Genbank Protein ID

KEH35049.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g078160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g078160	KEH35048	KEH35048
MTR_3g078160	KEH35047	KEH35047
MTR_3g078160	KEH35049	KEH35049

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-29	103.1	275	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++++CpIslelM+dPv++++G+ty r+sI+kw++ g+ tcP+t+++l +++l Pn++l+ liq++c +n++
   Q: 275  TPDDYRCPISLELMTDPVTVSTGQTYNRTSIQKWFKAGNMTCPKTGERLISTELFPNTALKTLIQQFCYDNKI 347
           599*****************************************************************99986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTPTQRRPLS FPAVHPCKSI SASTLLTSLI TLSQNICTFQ PNTFPTQKPY ARETKRQIQI 60
LLIFFQDLQS HNSFIPQPII PVFSELHFTL QKIHFLFQDC SIQGTGLLLL VKYQFVATQF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGTAACAT ACCTTCCTCC CTCCTGTGTT GGTTTAAAAT TTCACAGCCA TGCCACTGTC 60
ATGGATTCTA ATAAGCAGTT CCAAATCCAA TGGCAATGGA TTATTTATTT ATTTTAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043090	Glycine max	59.79	0.00e+00	771.00
IUUC-Hvu-047353	Hordeum vulgare	38.32	7.00e-109	387.00
IUUC-Lpe-051010	Leersia perrieri	36.41	2.00e-87	316.00
IUUC-Opu-083981	Oryza punctata	36.64	4.00e-109	388.00
IUUC-Sit-110113	Setaria italica	37.13	3.00e-114	405.00
IUUC-Sbi-114188	Sorghum bicolor	35.22	1.00e-106	380.00
IUUC-Tae-123313	Triticum aestivum	36.47	7.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence