iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113793

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G270300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g030410	Sb02g030410.1	Sb02g030410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.60e-08	33.4	129	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC++ +   ++  + lpC H++hadC+ +w       + +  CP+C+
   Q: 129  CVICKTTYksrQR-MIRLPCSHCYHADCITRW------LKINKACPICN 170
           ****999976555.777***************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATHTTYSVR VSSETHKIEA WVVSDEALAR QLQEEENTHD AAADTREFAG NVSLELSSPA 60
VEYRPTQNAA QVAREDNVDP DNMSYEQLQA LGEAVGTQSR GLSDELIAYL EPFRNKCTFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGATAGAGA GAGGGGGAGA GCGAGCCGGC AGCGGCGGCG GCGGCGCCAT CACTCCGTTC 60
TTCTCCGCTG ATCTGGGGCG AGGTACGCAC TGCTGCTATC TCCTTCCAGT TCGTTCGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g030410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015060	Brachypodium distachyon	82.02	5.00e-81	292.00
IUUC-Dse-031567	Dothistroma septosporum	32.20	1.00e-08	52.00
IUUC-Hvu-047079	Hordeum vulgare	79.43	2.00e-81	293.00
IUUC-Lpe-051529	Leersia perrieri	83.72	5.00e-86	308.00
IUUC-Oba-075527	Oryza barthii	84.97	7.00e-87	311.00
IUUC-Obr-076188	Oryza brachyantha	83.43	2.00e-87	313.00
IUUC-Ogu-078932	Oryza glumaepatula	84.39	3.00e-86	310.00
IUUC-Oin-079159	Oryza indica	85.14	2.00e-88	316.00
IUUC-Ome-081546	Oryza meridionalis	85.14	3.00e-88	316.00
IUUC-Oni-083074	Oryza nivara	87.78	2.00e-47	179.00
IUUC-Opu-083944	Oryza punctata	83.24	2.00e-84	303.00
IUUC-Oru-084406	Oryza rufipogon	87.78	2.00e-47	179.00
IUUC-Osa-085433	Oryza sativa	85.14	2.00e-88	316.00
IUUC-Sit-110502	Setaria italica	90.29	1.00e-94	337.00
IUUC-Tae-122732	Triticum aestivum	78.86	1.00e-80	290.00
IUUC-Tur-126630	Triticum urartu	68.97	4.00e-76	276.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence