iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014769

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100842169; BRADI_4g36580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G36580	BRADI4G36580.1	BRADI4G36580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-34	114.7	210	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+d v ++a+   d +++ s +dD+++++WDlrt+++++s
   Q: 210  HEDIVEDVAWhlKDgNIFGSVGDDCKLMMWDLRTNKPEQS 249
           9***********777*********************9986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDGGFSLPAA AAAAAMEMEE HLNWKKNAPV LYDLVISHAL DWPSLTVQWL PTQSPASAHS 60
HRLVLGTHAS DDFPNHLMIV DAVLPLPPRL AAAAAAEGRV VPDPSLSIGR SMPHRGEVNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGCG GCTTCTCCCT GCCGGCGGCT GCGGCGGCCG CCGCGATGGA GATGGAGGAG 60
CACCTGAACT GGAAGAAGAA CGCGCCGGTG CTCTACGACC TCGTCATCTC CCACGCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

bdi:100842169

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000234	Aegilops tauschii	81.09	4.00e-128	450.00
IUUC-Hvu-047186	Hordeum vulgare	86.09	7.00e-73	264.00
IUUC-Lpe-051076	Leersia perrieri	74.88	6.00e-170	589.00
IUUC-Mac-065577	Musa acuminata	63.33	2.00e-129	454.00
IUUC-Oba-075939	Oryza barthii	80.11	5.00e-162	563.00
IUUC-Obr-076642	Oryza brachyantha	84.68	0.00e+00	625.00
IUUC-Ogl-077012	Oryza glaberrima	84.53	4.00e-167	580.00
IUUC-Ogu-078437	Oryza glumaepatula	85.48	7.00e-169	585.00
IUUC-Oin-079872	Oryza indica	85.48	2.00e-169	587.00
IUUC-Olo-080709	Oryza longistaminata	89.51	6.00e-137	479.00
IUUC-Ome-081189	Oryza meridionalis	85.22	2.00e-166	577.00
IUUC-Oni-082852	Oryza nivara	85.22	2.00e-169	587.00
IUUC-Opu-083343	Oryza punctata	85.22	4.00e-163	566.00
IUUC-Oru-084993	Oryza rufipogon	85.75	7.00e-170	588.00
IUUC-Osa-086061	Oryza sativa	84.80	1.00e-167	582.00
IUUC-Sit-109983	Setaria italica	81.36	8.00e-170	588.00
IUUC-Sbi-114183	Sorghum bicolor	81.36	4.00e-167	580.00
IUUC-Tae-124496	Triticum aestivum	87.19	0.00e+00	652.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence