iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114183

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G280700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g031330	Sb02g031330.1	Sb02g031330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-34	117.7	214	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+d v ++a+   d +++ s +dD+++++WDlrt+++++s
   Q: 214  HEDLVEDVAWhlKDvNIFGSVGDDCKLMMWDLRTNKPEQS 253
           9***********999*********************9986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDGGSSTPAS PPPSAAASAA EMEEYRNWKK NAAVLYDLVI SHPLEWPSLT VQWLPSESSA 60
RTHRLVVGTH TSDEAPNNLM VLDAVLPLPP RLAAAAAASC GAVPSPSVSV SCVAPHRGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGCG GATCCTCCAC ACCGGCGAGC CCCCCACCGT CGGCGGCCGC GTCCGCGGCG 60
GAGATGGAGG AGTACCGGAA CTGGAAGAAG AACGCGGCGG TGCTTTACGA CCTCGTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sbi:SORBI_02g031330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000234	Aegilops tauschii	79.69	2.00e-121	428.00
IUUC-Bdi-014769	Brachypodium distachyon	81.36	3.00e-174	603.00
IUUC-Lpe-051076	Leersia perrieri	72.68	4.00e-166	576.00
IUUC-Mac-065577	Musa acuminata	64.78	3.00e-129	453.00
IUUC-Oba-075939	Oryza barthii	79.20	1.00e-160	558.00
IUUC-Obr-076642	Oryza brachyantha	82.64	2.00e-172	597.00
IUUC-Ogl-077012	Oryza glaberrima	83.08	2.00e-164	571.00
IUUC-Ogu-078437	Oryza glumaepatula	84.21	1.00e-165	574.00
IUUC-Oin-079872	Oryza indica	84.17	2.00e-165	574.00
IUUC-Olo-080709	Oryza longistaminata	87.04	1.00e-131	461.00
IUUC-Ome-081189	Oryza meridionalis	83.96	3.00e-161	560.00
IUUC-Oni-082852	Oryza nivara	83.96	3.00e-166	577.00
IUUC-Opu-083343	Oryza punctata	83.71	4.00e-162	563.00
IUUC-Oru-084993	Oryza rufipogon	84.43	1.00e-165	575.00
IUUC-Osa-086061	Oryza sativa	83.51	2.00e-163	567.00
IUUC-Sit-109983	Setaria italica	92.69	0.00e+00	653.00
IUUC-Tae-124651	Triticum aestivum	82.67	4.00e-172	596.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence