iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087302

Ensembl Protein ID

ENSORLP00000021318.1

UniProt Accession

H2MRD9; H2MRD9_ORYLA

Genbank Protein ID

ENSORLP00000021318

Protein Name

Protein HIRA

Genbank Nucleotide ID

BAAF04073288

Gene Name

hira; LOC101162764

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000017037.1	ENSORLT00000021319.1	ENSORLP00000021318.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-17	62.0	128	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           Ht++v ++a+  +d  l+s+s D+ti +W+ r++
   Q: 128  HTGDVMDVAWspHDVWLASCSVDNTIVIWNARKF 161
           9**********655999*************8766 PP

Organism

Oryzias latipes

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MKLLKPSWVS HNGKPIFSVD IHPDGTKFAT GGQDSSVCRR VGLHNIPQIY RYRNIKKSIN 60
HPAAFVPAAC VNCVRWSNNG LYLASGGDDK LVMVWKRAAL IGPSTVFGSS TKLANVEQWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTGC TGAAGCCGAG CTGGGTGAGC CACAACGGTA AGCTTGTGCA GGAATCTGTT 60
GGACCAAGTT GGGCTTTTGT TGTCGGAAGG GGGCGACCTG TTAGGGAGGT GTGATGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR019015--HIRA_B_motif
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF09453--HIRA_B
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	32.83	1.00e-79	291.00
IUUC-Aml-001723	Ailuropoda melanoleuca	63.81	0.00e+00	1146.00
IUUC-Atr-003132	Amborella trichopoda	34.31	7.00e-83	301.00
IUUC-Apl-003197	Anas platyrhynchos	63.79	0.00e+00	1216.00
IUUC-Aca-004733	Anolis carolinensis	62.90	0.00e+00	1213.00
IUUC-Aly-005446	Arabidopsis lyrata	35.96	2.00e-79	291.00
IUUC-Ath-007627	Arabidopsis thaliana	36.67	3.00e-80	293.00
IUUC-Ago-007766	Ashbya gossypii	31.12	1.00e-52	201.00
IUUC-Acl-008104	Aspergillus clavatus	31.17	6.00e-55	209.00
IUUC-Afl-008591	Aspergillus flavus	30.22	3.00e-53	204.00
IUUC-Afu-008781	Aspergillus fumigatus	28.63	3.00e-49	190.00
IUUC-Ani-009272	Aspergillus nidulans	28.80	7.00e-46	179.00
IUUC-Ang-009655	Aspergillus niger	31.14	1.00e-53	205.00
IUUC-Aor-010119	Aspergillus oryzae	27.34	3.00e-53	204.00
IUUC-Ate-010530	Aspergillus terreus	27.71	1.00e-46	181.00
IUUC-Ame-011147	Astyanax mexicanus	65.71	4.00e-31	125.00
IUUC-Bgr-012237	Blumeria graminis	30.69	5.00e-53	202.00
IUUC-Bta-013320	Bos taurus	63.96	0.00e+00	1189.00
IUUC-Bci-013795	Botrytis cinerea	28.41	2.00e-58	220.00
IUUC-Bdi-014075	Brachypodium distachyon	33.93	5.00e-83	302.00
IUUC-Bol-016440	Brassica oleracea	35.97	5.00e-82	299.00
IUUC-Bra-016651	Brassica rapa	35.65	2.00e-81	297.00
IUUC-Cel-018692	Caenorhabditis elegans	36.15	6.00e-65	242.00
IUUC-Cja-018987	Callithrix jacchus	64.94	0.00e+00	1112.00
IUUC-Cfa-020132	Canis familiaris	63.27	0.00e+00	1148.00
IUUC-Cpo-021484	Cavia porcellus	63.50	0.00e+00	1173.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	32.13	2.00e-52	201.00
IUUC-Csa-023081	Chlorocebus sabaeus	63.17	0.00e+00	1163.00
IUUC-Cin-025182	Ciona intestinalis	52.62	8.00e-141	494.00
IUUC-Csv-026154	Ciona savignyi	52.78	2.00e-146	513.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	28.49	2.00e-57	217.00
IUUC-Cne-026891	Cryptococcus neoformans	36.83	1.00e-69	258.00
IUUC-Cme-027349	Cyanidioschyzon merolae	30.35	2.00e-51	198.00
IUUC-Dre-027655	Danio rerio	74.52	0.00e+00	1427.00
IUUC-Dno-029557	Dasypus novemcinctus	59.51	0.00e+00	789.00
IUUC-Dor-030687	Dipodomys ordii	65.14	1.00e-165	577.00
IUUC-Dse-031334	Dothistroma septosporum	29.76	5.00e-58	219.00
IUUC-Dme-031746	Drosophila melanogaster	50.11	4.00e-139	489.00
IUUC-Ete-032384	Echinops telfairi	58.64	0.00e+00	1057.00
IUUC-Eca-033430	Equus caballus	62.89	0.00e+00	1143.00
IUUC-Fca-036121	Felis catus	63.73	0.00e+00	1150.00
IUUC-Fal-036817	Ficedula albicollis	63.96	0.00e+00	1217.00
IUUC-Fox-037906	Fusarium oxysporum	30.62	2.00e-58	220.00
IUUC-Fso-038409	Fusarium solani	30.64	1.00e-56	215.00
IUUC-Gmo-039151	Gadus morhua	71.53	0.00e+00	790.00
IUUC-Ggr-040016	Gaeumannomyces graminis	32.27	2.00e-58	221.00
IUUC-Gga-040936	Gallus gallus	65.71	0.00e+00	1267.00
IUUC-Gac-041405	Gasterosteus aculeatus	75.46	0.00e+00	1432.00
IUUC-Gma-044252	Glycine max	34.26	6.00e-82	298.00
IUUC-Ggo-045430	Gorilla gorilla	63.84	0.00e+00	1174.00
IUUC-Hsa-046442	Homo sapiens	64.07	0.00e+00	1171.00
IUUC-Hvu-047587	Hordeum vulgare	35.10	4.00e-73	269.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	79.28	2.00e-134	471.00
IUUC-Kpa-049145	Komagataella pastoris	29.44	1.00e-54	207.00
IUUC-Lch-050474	Latimeria chalumnae	77.03	0.00e+00	717.00
IUUC-Lpe-051209	Leersia perrieri	34.56	6.00e-77	282.00
IUUC-Loc-052119	Lepisosteus oculatus	70.04	0.00e+00	1324.00
IUUC-Lma-053237	Leptosphaeria maculans	30.59	2.00e-60	227.00
IUUC-Laf-053718	Loxodonta africana	63.50	0.00e+00	1169.00
IUUC-Mcc-055621	Macaca mulatta	64.23	0.00e+00	1105.00
IUUC-Meu-055914	Macropus eugenii	55.04	2.00e-177	616.00
IUUC-Mor-057090	Magnaporthe oryzae	32.66	4.00e-57	216.00
IUUC-Mpo-057364	Magnaporthe poae	32.51	1.00e-59	224.00
IUUC-Mtr-058691	Medicago truncatula	34.13	2.00e-81	297.00
IUUC-Mla-058914	Melampsora laricipopulina	39.05	3.00e-75	276.00
IUUC-Mga-060181	Meleagris gallopavo	64.84	0.00e+00	1231.00
IUUC-Mvi-060432	Microbotryum violaceum	35.79	1.00e-67	251.00
IUUC-Mmr-060871	Microcebus murinus	64.56	0.00e+00	1192.00
IUUC-Mdo-062301	Monodelphis domestica	63.56	0.00e+00	1192.00
IUUC-Mmu-063888	Mus musculus	63.25	0.00e+00	1172.00
IUUC-Mac-065137	Musa acuminata	35.90	2.00e-79	290.00
IUUC-Mpu-066732	Mustela putorius furo	64.01	0.00e+00	1157.00
IUUC-Mlu-067542	Myotis lucifugus	61.95	0.00e+00	1145.00
IUUC-Nfi-068396	Neosartorya fischeri	32.82	7.00e-49	189.00
IUUC-Ncr-068842	Neurospora crassa	29.22	1.00e-58	221.00
IUUC-Nle-070156	Nomascus leucogenys	63.58	0.00e+00	1172.00
IUUC-Opr-070808	Ochotona princeps	62.26	0.00e+00	941.00
IUUC-Ont-072105	Oreochromis niloticus	84.40	0.00e+00	1686.00
IUUC-Ocu-074962	Oryctolagus cuniculus	63.21	0.00e+00	1150.00
IUUC-Oba-075178	Oryza barthii	34.37	3.00e-82	299.00
IUUC-Obr-076399	Oryza brachyantha	35.11	2.00e-83	303.00
IUUC-Ogu-078797	Oryza glumaepatula	34.37	3.00e-82	299.00
IUUC-Oin-080085	Oryza indica	34.90	2.00e-72	267.00
IUUC-Olo-081048	Oryza longistaminata	39.09	3.00e-63	237.00
IUUC-Ome-081324	Oryza meridionalis	34.52	5.00e-82	299.00
IUUC-Oni-082548	Oryza nivara	34.37	4.00e-82	299.00
IUUC-Opu-084008	Oryza punctata	39.03	2.00e-81	296.00
IUUC-Oru-084339	Oryza rufipogon	34.37	5.00e-82	299.00
IUUC-Osa-085782	Oryza sativa	34.37	5.00e-82	299.00
IUUC-Olu-087611	Ostreococcus lucimarinus	35.03	7.00e-79	288.00
IUUC-Oga-087935	Otolemur garnettii	63.34	0.00e+00	1144.00
IUUC-Oar-089229	Ovis aries	60.09	0.00e+00	662.00
IUUC-Ptr-090715	Pan troglodytes	63.98	0.00e+00	1169.00
IUUC-Pan-092318	Papio anubis	63.09	0.00e+00	1142.00
IUUC-Psi-094053	Pelodiscus sinensis	64.48	0.00e+00	1216.00
IUUC-Pno-094985	Phaeosphaeria nodorum	30.43	1.00e-50	195.00
IUUC-Ppa-095819	Physcomitrella patens	36.70	2.00e-76	280.00
IUUC-Pfo-096857	Poecilia formosa	82.27	0.00e+00	1618.00
IUUC-Pab-098047	Pongo abelii	63.48	0.00e+00	1167.00
IUUC-Pop-099587	Populus trichocarpa	36.58	5.00e-82	299.00
IUUC-Pca-100558	Procavia capensis	57.11	1.00e-117	417.00
IUUC-Ppe-101261	Prunus persica	35.03	1.00e-81	298.00
IUUC-Pva-102683	Pteropus vampyrus	63.87	0.00e+00	1188.00
IUUC-Pgr-103660	Puccinia graminis	32.45	2.00e-68	253.00
IUUC-Ptt-103900	Puccinia triticina	37.83	2.00e-68	253.00
IUUC-Pte-104209	Pyrenophora teres	33.33	2.00e-58	221.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	33.33	7.00e-58	219.00
IUUC-Rno-105566	Rattus norvegicus	63.23	0.00e+00	1179.00
IUUC-Sce-106291	Saccharomyces cerevisiae	31.23	2.00e-56	214.00
IUUC-Sha-107514	Sarcophilus harrisii	60.50	0.00e+00	1090.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	33.13	5.00e-71	262.00
IUUC-Spo-108162	Schizosaccharomyces pombe	36.70	5.00e-69	256.00
IUUC-Smo-109186	Selaginella moellendorffii	38.77	9.00e-81	295.00
IUUC-Sit-110730	Setaria italica	35.50	3.00e-83	303.00
IUUC-Sly-111547	Solanum lycopersicum	34.54	1.00e-79	291.00
IUUC-Stu-112705	Solanum tuberosum	34.54	4.00e-80	293.00
IUUC-Sar-113222	Sorex araneus	67.40	0.00e+00	722.00
IUUC-Sbi-114528	Sorghum bicolor	35.04	4.00e-85	309.00
IUUC-Sre-115061	Sporisorium reilianum	33.82	5.00e-70	259.00
IUUC-Ssc-116364	Sus scrofa	62.96	0.00e+00	1203.00
IUUC-Tgu-116645	Taeniopygia guttata	64.70	0.00e+00	1239.00
IUUC-Tru-117590	Takifugu rubripes	81.44	0.00e+00	1582.00
IUUC-Tsy-119212	Tarsius syrichta	65.17	0.00e+00	686.00
IUUC-Tni-119915	Tetraodon nigroviridis	81.66	0.00e+00	1569.00
IUUC-Tca-121765	Theobroma cacao	35.14	8.00e-82	298.00
IUUC-Tre-121887	Trichoderma reesei	28.84	4.00e-54	206.00
IUUC-Tvi-122262	Trichoderma virens	28.90	1.00e-52	201.00
IUUC-Tae-124148	Triticum aestivum	29.57	6.00e-32	132.00
IUUC-Tur-126483	Triticum urartu	34.52	1.00e-82	301.00
IUUC-Tme-127202	Tuber melanosporum	27.47	1.00e-49	191.00
IUUC-Tbe-127350	Tupaia belangeri	73.76	8.00e-138	484.00
IUUC-Ttr-129077	Tursiops truncatus	60.25	0.00e+00	1132.00
IUUC-Uma-129465	Ustilago maydis	32.19	2.00e-71	264.00
IUUC-Vda-129844	Verticillium dahliae	30.68	9.00e-58	218.00
IUUC-Vvi-131397	Vitis vinifera	35.12	1.00e-83	304.00
IUUC-Xtr-132057	Xenopus tropicalis	70.52	0.00e+00	795.00
IUUC-Xma-134139	Xiphophorus maculatus	85.76	0.00e+00	1026.00
IUUC-Yli-134424	Yarrowia lipolytica	30.44	2.00e-58	221.00
IUUC-Zma-135506	Zea mays	34.67	2.00e-84	307.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence