iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000485

Ensembl Protein ID

EMT06540

UniProt Accession

M8AXW9; M8AXW9_AEGTA

Genbank Protein ID

EMT06540.1

Protein Name

RING-H2 finger protein ATL1R

Genbank Nucleotide ID

KD579084

Gene Name

F775_33078

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_33078	EMT06540	EMT06540

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-09	37.6	33	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  k++ +vlp CgH fh  C+ +w       + + +CP Cr
   Q: 33   CAICLSEFagKEEIRVLPqCGHGFHVACVDAW------LRAHSSCPSCR 75
           **********777*******************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAYEDAVAAA VAARGGPASA AAGEGQEGIL SECAICLSEF AGKEEIRVLP QCGHGFHVAC 60
VDAWLRAHSS CPSCRRVVVV VAADAAPRKT PPEPKRCRKC EAMEEASSST SATAGDHGAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTACG AGGACGCCGT GGCGGCGGCC GTCGCGGCGC GCGGCGGCCC GGCCTCCGCG 60
GCGGCCGGGG AGGGGCAGGA GGGGATCCTC TCGGAGTGCG CCATCTGCCT GTCGGAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_33078

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014441	Brachypodium distachyon	61.33	3.00e-17	81.30
IUUC-Hvu-047500	Hordeum vulgare	92.21	1.00e-31	127.00
IUUC-Lpe-051380	Leersia perrieri	67.53	1.00e-17	82.40
IUUC-Oba-075079	Oryza barthii	56.34	8.00e-15	73.20
IUUC-Ogl-077873	Oryza glaberrima	66.20	1.00e-14	72.80
IUUC-Ogu-078432	Oryza glumaepatula	66.20	1.00e-14	72.80
IUUC-Oin-080192	Oryza indica	66.20	1.00e-14	72.80
IUUC-Ome-081648	Oryza meridionalis	66.20	1.00e-14	72.40
IUUC-Oni-082702	Oryza nivara	66.20	1.00e-14	72.80
IUUC-Opu-083177	Oryza punctata	66.20	1.00e-14	72.80
IUUC-Oru-084251	Oryza rufipogon	66.20	1.00e-14	72.80
IUUC-Sbi-114504	Sorghum bicolor	66.67	1.00e-26	112.00
IUUC-Tae-124720	Triticum aestivum	100.00	3.00e-37	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence