iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114033

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G312800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g030420	Sb01g030420.1	Sb01g030420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-08	35.6	179	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f  +++++v+p CgH fh  C+  w       + + +CP Cr
   Q: 179  CAICLAEFgeREEVRVMPqCGHGFHVACVDTW------LRSNSSCPSCR 221
           ********98555*******************......99********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLRPSYSRRL LQSSSDSGGA ILPNPNQSPS RIPGIPPADP PPAVNSDVVV ILAALLCALI 60
CVVGLAAVAR CARSRRRNRG AEADDGAAPA SPSSNPGSGG GGGGGHHHHH HHAQQATGAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCCGGC CGTCGTACTC GCGGCGCCTC CTCCAGAGCA GCAGCGACAG CGGCGGCGCC 60
ATCCTCCCCA ACCCGAACCA GAGCCCGAGC CGCATCCCGG GCATCCCGCC CGCCGACCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g030420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014441	Brachypodium distachyon	86.57	2.00e-22	98.20
IUUC-Lpe-051380	Leersia perrieri	88.41	6.00e-26	110.00
IUUC-Oba-075079	Oryza barthii	94.20	4.00e-27	114.00
IUUC-Ogl-077873	Oryza glaberrima	94.20	8.00e-27	112.00
IUUC-Ogu-078432	Oryza glumaepatula	94.20	8.00e-27	112.00
IUUC-Oin-080192	Oryza indica	94.20	6.00e-27	113.00
IUUC-Ome-081648	Oryza meridionalis	94.20	9.00e-27	112.00
IUUC-Oni-082702	Oryza nivara	94.20	8.00e-27	112.00
IUUC-Opu-083177	Oryza punctata	94.20	7.00e-27	113.00
IUUC-Oru-084251	Oryza rufipogon	94.20	8.00e-27	112.00
IUUC-Tae-122880	Triticum aestivum	91.30	2.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence