iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111034

Ensembl Protein ID

Solyc10g052480.1.1

UniProt Accession

K4D0V0; K4D0V0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g052480.1	Solyc10g052480.1.1	Solyc10g052480.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-11	43.1	180	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+++  ++++l lpC H+fha+C+ kw        ++ +CPlCr
   Q: 180  CLVCLDELgeETQVLRLPCSHMFHAECITKW------LENSHYCPLCR 221
           ********5544488899*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MIPTDFVCHH CFKNTFVSVT PIAAAASSPY LTIIHFSFSL INHYWYIRPN DQPPEYWGVI 60
LENSPTTSTP IIVHLFDNMF YEKLNHAISH VFGPFEDVFG DQQYGIVEET IRQLQSIRAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTCCTA CAGATTTTGT ATGCCACCAT TGCTTCAAGA ACACTTTTGT TAGTGTTACA 60
CCAATTGCTG CTGCTGCTTC TTCACCCTAT TTAACCATTA TTCACTTTAG TTTCAGTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051679	Leersia perrieri	43.21	1.00e-12	67.80
IUUC-Ogu-078530	Oryza glumaepatula	47.95	3.00e-16	77.00
IUUC-Oin-079360	Oryza indica	52.00	2.00e-16	78.20
IUUC-Ome-081540	Oryza meridionalis	48.65	8.00e-17	79.30
IUUC-Oni-082142	Oryza nivara	52.00	2.00e-16	78.20
IUUC-Pop-099795	Populus trichocarpa	34.71	2.00e-21	95.10
IUUC-Pgr-103518	Puccinia graminis	44.07	1.00e-09	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence