iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079641

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA034370	BGIOSGA034370-TA	BGIOSGA034370-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-29	99.7	425	459

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++s+++++f +d ++l+sG+ D +++vW++ ++ 
   Q: 425  HEGSIWSIKFsPDgRFLASGGEDRVVHVWRVVDDG 459
           9**********999****************99876 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MTREHDGDGE EVATAVHGDA GAEEDGDRNV VDKSEFSDAV HVVVDRDDEE PEFPSDDDEG 60
GDDDVRVSFA TAVGDSDEHL REEQGELDLD DDDEEDVSRY EYDYGMWMEA EPMSIQERRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCCGCG AGCACGACGG CGACGGCGAG GAGGTGGCCA CCGCCGTCCA TGGTGATGCC 60
GGCGCCGAGG AAGACGGAGA CCGGAACGTC GTCGACAAGT CGGAGTTCTC CGACGCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006220	Arabidopsis lyrata	40.39	6.00e-129	454.00
IUUC-Bol-016392	Brassica oleracea	40.66	2.00e-127	449.00
IUUC-Lpe-051504	Leersia perrieri	70.52	0.00e+00	945.00
IUUC-Mac-065405	Musa acuminata	44.87	5.00e-156	544.00
IUUC-Oba-075376	Oryza barthii	99.63	4.00e-156	543.00
IUUC-Obr-076193	Oryza brachyantha	68.39	0.00e+00	837.00
IUUC-Ogl-077609	Oryza glaberrima	98.14	0.00e+00	1348.00
IUUC-Ogu-078960	Oryza glumaepatula	98.38	0.00e+00	1351.00
IUUC-Ome-081463	Oryza meridionalis	92.43	0.00e+00	1304.00
IUUC-Oni-083068	Oryza nivara	98.32	0.00e+00	1363.00
IUUC-Opu-083807	Oryza punctata	84.61	0.00e+00	1240.00
IUUC-Oru-085198	Oryza rufipogon	95.59	0.00e+00	1308.00
IUUC-Osa-085562	Oryza sativa	98.21	0.00e+00	1362.00
IUUC-Sit-110016	Setaria italica	49.83	3.00e-156	545.00
IUUC-Sbi-114190	Sorghum bicolor	49.67	0.00e+00	660.00
IUUC-Tae-123367	Triticum aestivum	58.07	0.00e+00	780.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence