iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__3305__AT4G05230.1	fgenesh2_kg.6__3305__AT4G05230.1	fgenesh2_kg.6__3305__AT4G05230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	2.10e-18	66.7	1	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           m++++ t +g +fe+e+   dtv e K+ki+k +++p+++q L ++G++L+D+  ++++ i + s + l ++ +
   Q: 1    MDVFFETRSGFTFEIELGYWDTVLEIKQKIEKYQQIPVSKQTLFFQGNVLQDHLDIEQCVILNHSRIQLFISSP 74
           899****************************************************************9999876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDVFFETRSG FTFEIELGYW DTVLEIKQKI EKYQQIPVSK QTLFFQGNVL QDHLDIEQCV 60
ILNHSRIQLF ISSPDQNRNN QVFKTEQSPQ SNSKEQITNN GHQDSPVMMP MSNNNNNNPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTGT TCTTCGAGAC TCGGAGCGGC TTCACGTTCG AGATTGAATT GGGTTATTGG 60
GATACAGTTT TGGAGATCAA ACAGAAGATC GAGAAGTATC AACAAATCCC TGTTTCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

aly:ARALYDRAFT_490171

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001136	Aegilops tauschii	52.38	3.00e-18	85.10
IUUC-Ath-007341	Arabidopsis thaliana	90.82	3.00e-101	360.00
IUUC-Bdi-014814	Brachypodium distachyon	28.99	5.00e-18	83.20
IUUC-Bol-015457	Brassica oleracea	79.81	2.00e-85	306.00
IUUC-Bra-016985	Brassica rapa	80.29	9.00e-87	311.00
IUUC-Gma-043557	Glycine max	44.10	6.00e-39	153.00
IUUC-Hvu-047481	Hordeum vulgare	53.57	7.00e-19	86.70
IUUC-Lpe-051654	Leersia perrieri	38.10	9.00e-27	112.00
IUUC-Mtr-057824	Medicago truncatula	39.25	9.00e-44	169.00
IUUC-Mac-065110	Musa acuminata	55.12	2.00e-55	207.00
IUUC-Obr-076204	Oryza brachyantha	68.09	2.00e-15	75.50
IUUC-Ogl-077464	Oryza glaberrima	52.33	2.00e-18	85.50
IUUC-Ogu-078789	Oryza glumaepatula	52.33	2.00e-18	85.10
IUUC-Oin-079834	Oryza indica	53.85	9.00e-18	83.20
IUUC-Ome-081807	Oryza meridionalis	52.50	4.00e-17	81.30
IUUC-Oni-082949	Oryza nivara	53.57	2.00e-18	85.90
IUUC-Opu-083919	Oryza punctata	51.14	2.00e-17	82.80
IUUC-Oru-084806	Oryza rufipogon	53.57	2.00e-18	85.90
IUUC-Pop-099086	Populus trichocarpa	42.41	7.00e-37	146.00
IUUC-Ppe-101213	Prunus persica	43.23	3.00e-40	157.00
IUUC-Sit-109925	Setaria italica	50.00	4.00e-18	85.10
IUUC-Sly-110909	Solanum lycopersicum	44.21	1.00e-28	119.00
IUUC-Sbi-114011	Sorghum bicolor	32.37	4.00e-23	100.00
IUUC-Tca-121426	Theobroma cacao	46.70	8.00e-36	143.00
IUUC-Tae-124195	Triticum aestivum	30.19	2.00e-10	58.20
IUUC-Tur-126620	Triticum urartu	40.10	5.00e-31	126.00
IUUC-Vvi-131330	Vitis vinifera	42.13	7.00e-40	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence