iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076656

Ensembl Protein ID

OB12G17210.1

UniProt Accession

J3NCL3; J3NCL3_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G17210	OB12G17210.1	OB12G17210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-23	83.6	34	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwl...asggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           v+++f+CpI++e+MrdPvv+++G+ ++r++I++w+       +      cPvt++p++  dl+P  +lr+ i++w ++++s
   Q: 34   VLSAFVCPITMEVMRDPVVVETGHAFEREAIARWFsacV---EdgarpRCPVTMEPVDGADLKPVMALRAAIEEWTDRRDS 111
           6789*******************************6551...444458***************************998875 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAQHRQGSQA WRDWCDGEGS DDDDDDGEEG VGGVLSAFVC PITMEVMRDP VVVETGHAFE 60
REAIARWFSA CVEDGARPRC PVTMEPVDGA DLKPVMALRA AIEEWTDRRD SAELRGACRW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGC ACCGCCAAGG ATCACAAGGT ATGTGGGGGC CGGGGCCCTG TTTCGTTGGT 60
GAGTTGCTCG CCGTGCTCGC AGGGCGTTCG ACGGATTGCT CACGAGGGTT CTTGCTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102707178

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051058	Leersia perrieri	85.79	0.00e+00	1285.00
IUUC-Oba-075503	Oryza barthii	88.88	0.00e+00	1415.00
IUUC-Ogl-077673	Oryza glaberrima	88.27	0.00e+00	1426.00
IUUC-Ogu-078148	Oryza glumaepatula	89.00	0.00e+00	1417.00
IUUC-Oin-080038	Oryza indica	88.51	0.00e+00	1430.00
IUUC-Olo-080957	Oryza longistaminata	89.12	0.00e+00	1419.00
IUUC-Ome-081569	Oryza meridionalis	89.36	0.00e+00	1421.00
IUUC-Oni-082401	Oryza nivara	89.00	0.00e+00	1416.00
IUUC-Opu-083886	Oryza punctata	86.33	0.00e+00	1362.00
IUUC-Oru-084768	Oryza rufipogon	89.55	0.00e+00	1419.00
IUUC-Osa-085588	Oryza sativa	88.51	0.00e+00	1431.00
IUUC-Sit-109984	Setaria italica	73.38	0.00e+00	1078.00
IUUC-Sbi-113783	Sorghum bicolor	63.50	0.00e+00	665.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence