iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017058

Ensembl Protein ID

Bra012249.1-P

UniProt Accession

M4D6Y9; M4D6Y9_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012249	Bra012249.1	Bra012249.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-26	92.8	23	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++e+f+Cp+++e+M+dPv+l++G t++r++Iek+++++       +cP+t+q+l+++d+ P+++lr++iq+w+++n+ 
   Q: 23   IYEAFICPLTKEVMHDPVTLENGRTFEREAIEKYFKQCSDsgkppSCPLTSQTLSSTDVSPSIALRNTIQEWRSRNDA 100
           89*********************************6555555579*****************************9975 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MVGSWDGSQS DDSSHFERGV DHIYEAFICP LTKEVMHDPV TLENGRTFER EAIEKYFKQC 60
SDSGKPPSCP LTSQTLSSTD VSPSIALRNT IQEWRSRNDA AKLDIARQAL FIGNDENDVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTGGAA GCTGGGATGG AAGCCAGTCT GATGACAGCT CTCACTTCGA GCGAGGCGTC 60
GATCACATCT ACGAAGCATT CATCTGCCCC TTGACTAAAG AGGTCATGCA CGACCCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002916	Amborella trichopoda	56.65	0.00e+00	843.00
IUUC-Aly-006004	Arabidopsis lyrata	86.64	0.00e+00	1313.00
IUUC-Ath-007153	Arabidopsis thaliana	87.04	0.00e+00	1318.00
IUUC-Bol-016384	Brassica oleracea	98.09	0.00e+00	1437.00
IUUC-Gma-043617	Glycine max	65.91	0.00e+00	999.00
IUUC-Lpe-050971	Leersia perrieri	58.22	0.00e+00	815.00
IUUC-Mtr-058511	Medicago truncatula	65.11	0.00e+00	1003.00
IUUC-Mac-064911	Musa acuminata	54.73	0.00e+00	808.00
IUUC-Oba-075225	Oryza barthii	58.47	0.00e+00	848.00
IUUC-Obr-076103	Oryza brachyantha	57.84	0.00e+00	813.00
IUUC-Ogl-077529	Oryza glaberrima	58.47	0.00e+00	847.00
IUUC-Ogu-078735	Oryza glumaepatula	58.22	0.00e+00	845.00
IUUC-Olo-080644	Oryza longistaminata	55.06	0.00e+00	773.00
IUUC-Ome-081455	Oryza meridionalis	58.22	0.00e+00	843.00
IUUC-Opu-083157	Oryza punctata	58.47	0.00e+00	847.00
IUUC-Pop-099966	Populus trichocarpa	65.72	0.00e+00	1003.00
IUUC-Ppe-101973	Prunus persica	63.37	0.00e+00	969.00
IUUC-Sly-111702	Solanum lycopersicum	65.50	0.00e+00	931.00
IUUC-Stu-111962	Solanum tuberosum	64.90	0.00e+00	995.00
IUUC-Sbi-113974	Sorghum bicolor	50.55	0.00e+00	710.00
IUUC-Tca-121113	Theobroma cacao	65.48	0.00e+00	1033.00
IUUC-Tur-126573	Triticum urartu	57.07	0.00e+00	829.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence