iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068848

Ensembl Protein ID

EAA27270

UniProt Accession

F5HCE4; F5HCE4_NEUCR

Genbank Protein ID

EAA27270.2

Protein Name

SOF1

Genbank Nucleotide ID

CM002237

Gene Name

NCU01595

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU01595	EAA27270	EAA27270

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-38	126.1	64	99
UBD/Beta-Prp	1.60e-41	141.5	153	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           gH  +v+++a   ++ ++++sGs+Dg +kvWDl+t 
   Q: 64   GHVQGVYSMAKdkNSlHTIASGSGDGIVKVWDLTTR 99
           788889998778777788***************985 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgd 107
           ++ t++ f+++++ ++++s  g+i++wd++  ++ +++   +h++++t+v+f++ +  i  ++++Dr + ++dl+t+ +v++    ++ +  + f+p +  
   Q: 153  GPYTALSFHRNTNSFVASSGAGCIRIWDLEHSTAPQTIqwPNHSDTITDVCFNQVETsIVGSVGTDRSVILFDLRTNMPVIKTV-LKFAANRIVFNPmEAM 252
           67899*****************************8888668*************9875777899**************999998.9***********777* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
            ++++s+d  + ++d ++ ++ +++++gh ++v+ v+++p+g  lv+Gs+Drt+r+W+  +g   +    +  ++v  ++++ ++k+l+sgs+dg v+lw 
   Q: 253  NMAVASEDHNVYLFDARNFTKAQNIQKGHVAAVMDVEFSPTGEELVTGSYDRTIRVWRRDQGMSRDVYHTKRMQRVFRTTWTMDSKYLLSGSDDGNVRLWR 353
           *********************************************************99888888888666888888888********************9 PP
   S: 209  lqtge 213
             ++e
   Q: 354  ANASE 358
           98433 PP

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MKIKALSRNI SAQQAPGNDV TRAPRNLAPE LHPFERAREY KRALNAVKLE RVFAKPFLGQ 60
LGNGHVQGVY SMAKDKNSLH TIASGSGDGI VKVWDLTTRD EAWKAAAHNN IVKGMTFTND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTGTCAAA CTGCCCGTGT CCGACTGTGC TCCCCAATTG GCGACAGACG CTCCCGGCAT 60
CCATCCATCC ATCCATTCAT TAATTCCAAC GTCGATAACT GTATCACAGC ACCTGTGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ncr:NCU01595

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	41.23	2.00e-93	333.00
IUUC-Atr-002799	Amborella trichopoda	41.39	3.00e-96	343.00
IUUC-Apl-003675	Anas platyrhynchos	43.14	1.00e-91	328.00
IUUC-Aca-004792	Anolis carolinensis	41.85	5.00e-97	346.00
IUUC-Aly-005998	Arabidopsis lyrata	39.82	2.00e-95	341.00
IUUC-Ath-007526	Arabidopsis thaliana	39.39	3.00e-93	333.00
IUUC-Ago-007774	Ashbya gossypii	50.00	3.00e-122	429.00
IUUC-Acl-008024	Aspergillus clavatus	62.61	5.00e-166	575.00
IUUC-Afu-008930	Aspergillus fumigatus	60.26	4.00e-165	572.00
IUUC-Ani-009370	Aspergillus nidulans	63.53	2.00e-169	586.00
IUUC-Ang-009827	Aspergillus niger	64.65	2.00e-171	593.00
IUUC-Aor-010060	Aspergillus oryzae	62.70	5.00e-165	572.00
IUUC-Ate-010434	Aspergillus terreus	63.91	2.00e-138	483.00
IUUC-Ame-011967	Astyanax mexicanus	40.00	1.00e-95	341.00
IUUC-Bgr-011989	Blumeria graminis	65.54	6.00e-179	618.00
IUUC-Bta-013291	Bos taurus	30.93	1.00e-50	191.00
IUUC-Bci-013868	Botrytis cinerea	66.44	1.00e-180	624.00
IUUC-Bdi-014343	Brachypodium distachyon	41.47	3.00e-92	330.00
IUUC-Bol-015740	Brassica oleracea	40.10	2.00e-87	314.00
IUUC-Bra-016689	Brassica rapa	40.10	5.00e-87	312.00
IUUC-Cel-018536	Caenorhabditis elegans	37.65	1.00e-74	271.00
IUUC-Cja-018779	Callithrix jacchus	41.36	8.00e-95	338.00
IUUC-Cfa-020105	Canis familiaris	41.79	1.00e-95	341.00
IUUC-Cpo-021538	Cavia porcellus	43.03	5.00e-94	336.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	50.31	5.00e-44	168.00
IUUC-Csa-023492	Chlorocebus sabaeus	41.79	2.00e-95	341.00
IUUC-Cho-024497	Choloepus hoffmanni	36.24	4.00e-51	193.00
IUUC-Cin-025524	Ciona intestinalis	41.83	9.00e-94	335.00
IUUC-Csv-026197	Ciona savignyi	41.03	3.00e-93	333.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	63.45	1.00e-170	590.00
IUUC-Cne-026840	Cryptococcus neoformans	43.10	7.00e-67	247.00
IUUC-Cme-027111	Cyanidioschyzon merolae	35.35	9.00e-75	272.00
IUUC-Dre-027471	Danio rerio	40.78	1.00e-97	348.00
IUUC-Dno-029790	Dasypus novemcinctus	43.97	5.00e-77	279.00
IUUC-Dor-030971	Dipodomys ordii	34.35	2.00e-62	231.00
IUUC-Dse-031563	Dothistroma septosporum	58.88	3.00e-158	549.00
IUUC-Dme-032161	Drosophila melanogaster	41.40	1.00e-92	332.00
IUUC-Ete-033127	Echinops telfairi	39.43	2.00e-83	301.00
IUUC-Eca-033531	Equus caballus	42.09	7.00e-92	328.00
IUUC-Eeu-034663	Erinaceus europaeus	37.04	6.00e-75	273.00
IUUC-Fca-036258	Felis catus	41.79	9.00e-96	342.00
IUUC-Fal-037456	Ficedula albicollis	42.31	1.00e-92	332.00
IUUC-Fox-038025	Fusarium oxysporum	66.74	0.00e+00	632.00
IUUC-Fso-038344	Fusarium solani	66.89	3.00e-171	592.00
IUUC-Gmo-039643	Gadus morhua	40.40	1.00e-93	335.00
IUUC-Ggr-039816	Gaeumannomyces graminis	64.94	5.00e-163	565.00
IUUC-Gga-040143	Gallus gallus	43.10	1.00e-95	342.00
IUUC-Gac-041665	Gasterosteus aculeatus	42.63	3.00e-98	350.00
IUUC-Gma-043073	Glycine max	39.22	7.00e-92	329.00
IUUC-Ggo-045058	Gorilla gorilla	41.50	4.00e-95	340.00
IUUC-Hsa-046843	Homo sapiens	41.50	9.00e-95	338.00
IUUC-Hvu-047654	Hordeum vulgare	44.74	4.00e-57	213.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	41.58	7.00e-96	342.00
IUUC-Kpa-049232	Komagataella pastoris	48.91	4.00e-127	446.00
IUUC-Lch-050542	Latimeria chalumnae	42.69	8.00e-95	338.00
IUUC-Lpe-051622	Leersia perrieri	40.70	1.00e-92	331.00
IUUC-Loc-052674	Lepisosteus oculatus	41.77	3.00e-98	350.00
IUUC-Lma-053108	Leptosphaeria maculans	60.99	1.00e-163	567.00
IUUC-Laf-053385	Loxodonta africana	42.23	5.00e-94	336.00
IUUC-Mcc-055151	Macaca mulatta	41.79	4.00e-95	339.00
IUUC-Meu-056230	Macropus eugenii	41.55	2.00e-37	147.00
IUUC-Mor-057013	Magnaporthe oryzae	64.72	8.00e-164	568.00
IUUC-Mpo-057530	Magnaporthe poae	65.39	8.00e-165	571.00
IUUC-Mtr-058187	Medicago truncatula	38.56	9.00e-91	325.00
IUUC-Mla-058964	Melampsora laricipopulina	36.74	6.00e-84	302.00
IUUC-Mga-059712	Meleagris gallopavo	43.32	1.00e-92	331.00
IUUC-Mvi-060370	Microbotryum violaceum	39.70	4.00e-64	236.00
IUUC-Mmr-061340	Microcebus murinus	41.14	2.00e-92	331.00
IUUC-Mdo-062978	Monodelphis domestica	42.57	8.00e-97	345.00
IUUC-Mmu-063439	Mus musculus	42.23	4.00e-98	349.00
IUUC-Mac-065129	Musa acuminata	40.88	2.00e-97	347.00
IUUC-Mpu-066548	Mustela putorius furo	39.84	6.00e-72	262.00
IUUC-Mlu-067660	Myotis lucifugus	41.36	3.00e-95	340.00
IUUC-Nfi-068455	Neosartorya fischeri	63.51	5.00e-169	585.00
IUUC-Nle-069923	Nomascus leucogenys	41.28	1.00e-94	338.00
IUUC-Opr-070279	Ochotona princeps	29.63	5.00e-19	87.00
IUUC-Ont-072234	Oreochromis niloticus	41.67	1.00e-98	351.00
IUUC-Oan-073713	Ornithorhynchus anatinus	39.41	1.00e-28	117.00
IUUC-Ocu-073782	Oryctolagus cuniculus	42.23	5.00e-97	346.00
IUUC-Oba-075161	Oryza barthii	41.14	1.00e-93	335.00
IUUC-Obr-076868	Oryza brachyantha	40.52	2.00e-93	334.00
IUUC-Ogl-077062	Oryza glaberrima	41.14	1.00e-93	335.00
IUUC-Ogu-078308	Oryza glumaepatula	41.14	9.00e-94	335.00
IUUC-Oin-079378	Oryza indica	41.14	9.00e-94	335.00
IUUC-Olo-080638	Oryza longistaminata	39.61	3.00e-86	310.00
IUUC-Oni-082368	Oryza nivara	41.14	9.00e-94	335.00
IUUC-Opu-083628	Oryza punctata	41.14	9.00e-94	335.00
IUUC-Oru-085226	Oryza rufipogon	40.92	3.00e-93	333.00
IUUC-Osa-085368	Oryza sativa	33.96	4.00e-37	146.00
IUUC-Ola-086836	Oryzias latipes	43.11	4.00e-100	356.00
IUUC-Olu-087755	Ostreococcus lucimarinus	40.55	5.00e-94	336.00
IUUC-Oga-088170	Otolemur garnettii	41.69	1.00e-95	341.00
IUUC-Oar-089388	Ovis aries	42.57	4.00e-97	346.00
IUUC-Ptr-090494	Pan troglodytes	41.50	8.00e-95	339.00
IUUC-Pan-091697	Papio anubis	41.79	2.00e-95	340.00
IUUC-Psi-093916	Pelodiscus sinensis	42.06	3.00e-93	333.00
IUUC-Pno-095004	Phaeosphaeria nodorum	58.97	7.00e-154	535.00
IUUC-Ppa-095514	Physcomitrella patens	39.39	2.00e-93	334.00
IUUC-Pfo-097432	Poecilia formosa	43.58	5.00e-100	356.00
IUUC-Pab-098423	Pongo abelii	41.50	2.00e-95	340.00
IUUC-Pop-099649	Populus trichocarpa	39.17	3.00e-95	340.00
IUUC-Pca-100365	Procavia capensis	41.61	4.00e-89	320.00
IUUC-Ppe-101350	Prunus persica	39.68	1.00e-95	341.00
IUUC-Pva-102845	Pteropus vampyrus	41.98	2.00e-96	344.00
IUUC-Pgr-103469	Puccinia graminis	35.65	9.00e-59	219.00
IUUC-Ptt-103980	Puccinia triticina	35.77	7.00e-59	219.00
IUUC-Pte-104111	Pyrenophora teres	62.78	9.00e-157	544.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	62.78	3.00e-157	546.00
IUUC-Rno-105082	Rattus norvegicus	42.23	3.00e-98	350.00
IUUC-Sce-106340	Saccharomyces cerevisiae	48.12	3.00e-123	433.00
IUUC-Sha-106584	Sarcophilus harrisii	42.67	1.00e-98	351.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	49.89	2.00e-110	390.00
IUUC-Spo-108046	Schizosaccharomyces pombe	48.42	5.00e-119	419.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	66.22	4.00e-180	622.00
IUUC-Smo-109548	Selaginella moellendorffii	42.11	2.00e-101	360.00
IUUC-Sit-110242	Setaria italica	41.14	3.00e-92	330.00
IUUC-Sly-111762	Solanum lycopersicum	38.95	2.00e-89	320.00
IUUC-Stu-112156	Solanum tuberosum	38.95	7.00e-90	322.00
IUUC-Sbi-114739	Sorghum bicolor	42.45	2.00e-95	340.00
IUUC-Sre-114951	Sporisorium reilianum	41.03	6.00e-102	362.00
IUUC-Ssc-115510	Sus scrofa	42.01	7.00e-96	342.00
IUUC-Tgu-117234	Taeniopygia guttata	42.69	1.00e-90	324.00
IUUC-Tru-117986	Takifugu rubripes	42.21	5.00e-98	349.00
IUUC-Tsy-119252	Tarsius syrichta	41.19	6.00e-87	313.00
IUUC-Tni-119785	Tetraodon nigroviridis	42.99	3.00e-96	343.00
IUUC-Tca-121222	Theobroma cacao	39.82	7.00e-93	332.00
IUUC-Tre-122243	Trichoderma reesei	66.07	0.00e+00	627.00
IUUC-Tvi-122293	Trichoderma virens	64.94	6.00e-179	618.00
IUUC-Tae-124545	Triticum aestivum	41.47	6.00e-84	302.00
IUUC-Tur-126098	Triticum urartu	40.28	2.00e-82	298.00
IUUC-Tme-127200	Tuber melanosporum	55.36	4.00e-145	506.00
IUUC-Tbe-127568	Tupaia belangeri	33.33	1.00e-32	132.00
IUUC-Ttr-129185	Tursiops truncatus	36.59	1.00e-74	272.00
IUUC-Uma-129353	Ustilago maydis	40.86	8.00e-102	362.00
IUUC-Vda-129768	Verticillium dahliae	62.78	3.00e-172	595.00
IUUC-Vpa-130572	Vicugna pacos	42.01	1.00e-95	342.00
IUUC-Vvi-131555	Vitis vinifera	41.36	2.00e-96	344.00
IUUC-Xtr-132263	Xenopus tropicalis	40.86	5.00e-76	275.00
IUUC-Xma-133925	Xiphophorus maculatus	44.47	2.00e-100	357.00
IUUC-Yli-134384	Yarrowia lipolytica	48.71	7.00e-124	435.00
IUUC-Zma-135616	Zea mays	42.42	3.00e-93	333.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence