iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017465

Ensembl Protein ID

Bra016929.1-P

UniProt Accession

M4DKA0; M4DKA0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016929	Bra016929.1	Bra016929.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-35	118.3	410	442
UBD/Beta-Prp	8.90e-60	203.4	243	465

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH  +v ++ f ++  +l+sG+ D+++++WDlr
   Q: 410  GHIKPVLSVTFsPNgYHLASGGEDNQCRIWDLR 442
           7999********77799**************97 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvtt.gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           ++ ++t   fs+d+++lat s +g +k+w++ +  ++++ l++h++  t+v fsp ++ l+t+s Drt+k+w  + g+ ++t++gh d++  ++f+
   Q: 243  DDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQvTNKIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAFH 337
           5779999***********************98824559**********************************975.89****************** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           psg++l ++s d+t r+wd++tg +l  +++gh+++v ++++++dg l +s++lD+  r+Wdl+tg+ +  ++g h ++v s++f++ng +l+sg+
   Q: 338  PSGKYLGTTSFDKTWRMWDINTGAELL-LQEGHSRSVYGIAFQQDGALAASSGLDSLARVWDLRTGRSILVFQG-HIKPVLSVTFSPNGYHLASGG 431
           ***************************.*********************************************9.********************* PP
   S: 200  ldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
           +d++ ++wdl+  + +++  +h + v++v+  p+
   Q: 432  EDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQ 465
           *****************************98766 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEPNNEDNVS FIPSASPAVP ITQITAAPVP GVSPIPPPSF PPPMAPIPVA RPPTFRPPQN 60
GGAKASDSDS ESDDEHYVIS EESKQVRERQ EKAMQELLIK RRAAAIAVPT NDKSVRDRLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACCCA ACAATGAAGA TAATGTTTCA TTCATACCAT CAGCTTCGCC TGCAGTTCCT 60
ATTACTCAAA TCACAGCAGC TCCAGTTCCA GGTGAGTTAT TTAGTTTTCG AGTGATTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0016607--C:nuclear speck
GO:0001709--P:cell fate determination
GO:0007267--P:cell-cell signaling
GO:0009560--P:embryo sac egg cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	66.98	3.00e-160	557.00
IUUC-Aml-001737	Ailuropoda melanoleuca	43.54	2.00e-108	385.00
IUUC-Atr-002828	Amborella trichopoda	64.84	2.00e-170	591.00
IUUC-Apl-003723	Anas platyrhynchos	44.12	8.00e-109	387.00
IUUC-Aca-004972	Anolis carolinensis	43.46	2.00e-106	379.00
IUUC-Aly-006531	Arabidopsis lyrata	85.35	0.00e+00	815.00
IUUC-Ath-007367	Arabidopsis thaliana	83.09	0.00e+00	887.00
IUUC-Ago-007893	Ashbya gossypii	34.20	4.00e-56	212.00
IUUC-Acl-008236	Aspergillus clavatus	35.54	8.00e-75	274.00
IUUC-Afl-008522	Aspergillus flavus	36.25	7.00e-78	284.00
IUUC-Afu-008904	Aspergillus fumigatus	36.31	3.00e-79	288.00
IUUC-Ani-009198	Aspergillus nidulans	37.68	1.00e-80	293.00
IUUC-Ang-009662	Aspergillus niger	39.38	9.00e-83	300.00
IUUC-Aor-009881	Aspergillus oryzae	36.05	4.00e-78	285.00
IUUC-Ate-010333	Aspergillus terreus	36.08	2.00e-75	276.00
IUUC-Ame-011697	Astyanax mexicanus	41.46	5.00e-106	377.00
IUUC-Bgr-012254	Blumeria graminis	35.58	9.00e-79	287.00
IUUC-Bta-012615	Bos taurus	43.54	9.00e-109	387.00
IUUC-Bci-013720	Botrytis cinerea	37.61	4.00e-81	295.00
IUUC-Bdi-014302	Brachypodium distachyon	67.43	1.00e-169	588.00
IUUC-Bol-015594	Brassica oleracea	99.59	0.00e+00	910.00
IUUC-Cel-018632	Caenorhabditis elegans	35.78	4.00e-74	271.00
IUUC-Cja-019747	Callithrix jacchus	43.54	1.00e-108	386.00
IUUC-Cfa-020288	Canis familiaris	43.54	2.00e-108	386.00
IUUC-Cpo-021440	Cavia porcellus	43.33	2.00e-108	385.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	49.86	5.00e-97	347.00
IUUC-Csa-023139	Chlorocebus sabaeus	46.22	4.00e-89	320.00
IUUC-Cho-024481	Choloepus hoffmanni	42.54	8.00e-106	377.00
IUUC-Cin-025106	Ciona intestinalis	38.44	2.00e-92	332.00
IUUC-Csv-026087	Ciona savignyi	39.78	7.00e-94	337.00
IUUC-Cne-026793	Cryptococcus neoformans	37.23	1.00e-86	313.00
IUUC-Dre-028723	Danio rerio	42.60	5.00e-106	377.00
IUUC-Dno-029299	Dasypus novemcinctus	43.33	4.00e-108	384.00
IUUC-Dse-031562	Dothistroma septosporum	35.50	4.00e-75	275.00
IUUC-Dme-031783	Drosophila melanogaster	39.64	2.00e-81	296.00
IUUC-Ete-032669	Echinops telfairi	43.98	3.00e-110	392.00
IUUC-Eca-033566	Equus caballus	43.54	2.00e-108	385.00
IUUC-Eeu-034524	Erinaceus europaeus	49.36	3.00e-69	255.00
IUUC-Fca-036215	Felis catus	43.54	1.00e-108	386.00
IUUC-Fal-037018	Ficedula albicollis	42.27	2.00e-89	322.00
IUUC-Fox-037936	Fusarium oxysporum	34.11	1.00e-70	259.00
IUUC-Fso-038366	Fusarium solani	34.74	5.00e-75	275.00
IUUC-Gmo-038966	Gadus morhua	41.26	1.00e-79	289.00
IUUC-Ggr-039942	Gaeumannomyces graminis	34.57	4.00e-70	258.00
IUUC-Gga-040797	Gallus gallus	43.33	4.00e-109	388.00
IUUC-Gac-042598	Gasterosteus aculeatus	40.76	2.00e-95	342.00
IUUC-Gma-044097	Glycine max	69.21	2.00e-171	595.00
IUUC-Ggo-044682	Gorilla gorilla	43.54	2.00e-108	385.00
IUUC-Hsa-045804	Homo sapiens	43.54	1.00e-108	386.00
IUUC-Hvu-047567	Hordeum vulgare	65.96	6.00e-155	540.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	43.76	4.00e-109	388.00
IUUC-Kpa-049369	Komagataella pastoris	32.17	2.00e-53	202.00
IUUC-Lch-050074	Latimeria chalumnae	42.60	2.00e-94	339.00
IUUC-Lpe-051333	Leersia perrieri	65.96	4.00e-150	523.00
IUUC-Loc-052164	Lepisosteus oculatus	42.20	2.00e-106	379.00
IUUC-Lma-053088	Leptosphaeria maculans	37.92	5.00e-76	278.00
IUUC-Laf-053460	Loxodonta africana	43.54	1.00e-108	386.00
IUUC-Mcc-055859	Macaca mulatta	43.54	1.00e-108	386.00
IUUC-Meu-056134	Macropus eugenii	42.89	9.00e-107	380.00
IUUC-Mor-057251	Magnaporthe oryzae	35.55	2.00e-74	272.00
IUUC-Mpo-057375	Magnaporthe poae	41.20	7.00e-54	203.00
IUUC-Mtr-057656	Medicago truncatula	69.43	3.00e-159	554.00
IUUC-Mla-059145	Melampsora laricipopulina	39.64	5.00e-82	298.00
IUUC-Mga-059855	Meleagris gallopavo	43.68	6.00e-109	387.00
IUUC-Mvi-060372	Microbotryum violaceum	40.25	5.00e-75	275.00
IUUC-Mmr-060826	Microcebus murinus	43.76	1.00e-108	386.00
IUUC-Mdo-062748	Monodelphis domestica	42.89	5.00e-107	381.00
IUUC-Mmu-063351	Mus musculus	43.33	1.00e-107	383.00
IUUC-Mac-064846	Musa acuminata	68.31	1.00e-161	562.00
IUUC-Mpu-066006	Mustela putorius furo	43.54	1.00e-108	386.00
IUUC-Mlu-067398	Myotis lucifugus	43.54	1.00e-108	386.00
IUUC-Nfi-068399	Neosartorya fischeri	37.17	2.00e-81	296.00
IUUC-Ncr-068711	Neurospora crassa	37.39	1.00e-81	296.00
IUUC-Nle-069982	Nomascus leucogenys	43.54	1.00e-108	386.00
IUUC-Opr-070596	Ochotona princeps	43.54	2.00e-108	385.00
IUUC-Ont-072374	Oreochromis niloticus	43.26	8.00e-100	357.00
IUUC-Oan-073166	Ornithorhynchus anatinus	45.30	4.00e-94	337.00
IUUC-Ocu-074371	Oryctolagus cuniculus	43.33	5.00e-108	384.00
IUUC-Oba-075083	Oryza barthii	65.78	3.00e-160	558.00
IUUC-Obr-076405	Oryza brachyantha	67.61	9.00e-158	549.00
IUUC-Ogl-077683	Oryza glaberrima	65.78	4.00e-160	557.00
IUUC-Ogu-078486	Oryza glumaepatula	66.00	2.00e-160	558.00
IUUC-Oin-079679	Oryza indica	65.78	2.00e-165	575.00
IUUC-Olo-080243	Oryza longistaminata	66.41	5.00e-142	497.00
IUUC-Ome-081230	Oryza meridionalis	65.78	2.00e-165	575.00
IUUC-Oni-082961	Oryza nivara	65.78	2.00e-165	575.00
IUUC-Opu-083189	Oryza punctata	65.78	3.00e-164	571.00
IUUC-Oru-084353	Oryza rufipogon	66.75	1.00e-160	559.00
IUUC-Osa-085458	Oryza sativa	65.78	2.00e-165	575.00
IUUC-Ola-086940	Oryzias latipes	43.02	2.00e-105	375.00
IUUC-Olu-087580	Ostreococcus lucimarinus	37.34	3.00e-71	262.00
IUUC-Oga-088703	Otolemur garnettii	41.01	1.00e-101	363.00
IUUC-Oar-089829	Ovis aries	43.54	1.00e-108	387.00
IUUC-Ptr-090838	Pan troglodytes	43.54	1.00e-108	386.00
IUUC-Pan-092261	Papio anubis	43.45	2.00e-107	382.00
IUUC-Psi-093020	Pelodiscus sinensis	42.79	5.00e-107	381.00
IUUC-Pno-094858	Phaeosphaeria nodorum	38.08	2.00e-76	279.00
IUUC-Ppa-095531	Physcomitrella patens	59.70	8.00e-159	553.00
IUUC-Pfo-096812	Poecilia formosa	40.05	2.00e-83	302.00
IUUC-Pab-097805	Pongo abelii	45.00	2.00e-89	322.00
IUUC-Pop-100051	Populus trichocarpa	70.90	2.00e-179	622.00
IUUC-Pca-100152	Procavia capensis	43.33	3.00e-108	385.00
IUUC-Ppe-101244	Prunus persica	68.22	2.00e-168	584.00
IUUC-Pva-102529	Pteropus vampyrus	41.79	3.00e-101	361.00
IUUC-Pgr-103550	Puccinia graminis	35.01	4.00e-83	301.00
IUUC-Ptt-103951	Puccinia triticina	31.26	2.00e-69	256.00
IUUC-Pte-104151	Pyrenophora teres	36.09	2.00e-70	259.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	36.52	4.00e-71	261.00
IUUC-Rno-105747	Rattus norvegicus	43.33	1.00e-107	383.00
IUUC-Sce-106418	Saccharomyces cerevisiae	32.71	6.00e-59	221.00
IUUC-Sha-107334	Sarcophilus harrisii	42.89	1.00e-106	379.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	34.69	1.00e-64	239.00
IUUC-Spo-108189	Schizosaccharomyces pombe	39.45	7.00e-84	304.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	36.75	1.00e-79	290.00
IUUC-Smo-108924	Selaginella moellendorffii	58.59	4.00e-147	514.00
IUUC-Sit-110102	Setaria italica	66.23	5.00e-162	563.00
IUUC-Sly-111668	Solanum lycopersicum	69.01	8.00e-173	599.00
IUUC-Stu-111928	Solanum tuberosum	70.48	1.00e-172	599.00
IUUC-Sar-113266	Sorex araneus	43.33	6.00e-89	321.00
IUUC-Sbi-114134	Sorghum bicolor	66.23	5.00e-162	563.00
IUUC-Sre-115114	Sporisorium reilianum	39.96	3.00e-84	305.00
IUUC-Ssc-115443	Sus scrofa	43.54	2.00e-108	385.00
IUUC-Tgu-117157	Taeniopygia guttata	43.68	3.00e-109	388.00
IUUC-Tru-118587	Takifugu rubripes	45.12	1.00e-105	376.00
IUUC-Tsy-119157	Tarsius syrichta	45.83	3.00e-96	345.00
IUUC-Tni-120427	Tetraodon nigroviridis	44.27	1.00e-103	370.00
IUUC-Tca-121368	Theobroma cacao	74.51	0.00e+00	674.00
IUUC-Tre-122074	Trichoderma reesei	36.00	6.00e-74	271.00
IUUC-Tvi-122349	Trichoderma virens	35.16	6.00e-74	271.00
IUUC-Tae-125651	Triticum aestivum	66.97	1.00e-164	572.00
IUUC-Tur-126532	Triticum urartu	67.38	2.00e-147	515.00
IUUC-Tme-126951	Tuber melanosporum	39.03	4.00e-78	285.00
IUUC-Tbe-128136	Tupaia belangeri	40.04	3.00e-94	338.00
IUUC-Ttr-129169	Tursiops truncatus	37.50	3.00e-50	192.00
IUUC-Uma-129399	Ustilago maydis	37.30	1.00e-82	300.00
IUUC-Vda-129842	Verticillium dahliae	36.50	3.00e-81	295.00
IUUC-Vpa-130440	Vicugna pacos	43.54	1.00e-108	386.00
IUUC-Vvi-131075	Vitis vinifera	71.14	1.00e-174	606.00
IUUC-Xma-133002	Xiphophorus maculatus	45.38	2.00e-89	322.00
IUUC-Yli-134569	Yarrowia lipolytica	36.42	5.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence