iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001507

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01035338

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000005886.1	ENSAMET00000006503.1	ENSAMEP00000006248.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-17	62.1	369	408

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+d v+cl+  ++   l+sGsdDg+++ W++ t ++l++
   Q: 369  GHSDLVRCLSVsPEgQWLASGSDDGSVRFWEVATARCLRT 408
           8**********999999********************985 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

LACAPAPSLQ DGSSSGLSES EESVFSGLED SGSDSSEDDP AKEEDGVSSD ESHGETEKTT 60
EQRVQDGTPS PRTAVARVQG CEEYAEDSSD EEDIRNTVGN VPLEWYDDFP HVGYDLDGRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGCCTGTG CTCCTGCTCC CAGCCTCCAG GATGGCAGCA GTTCTGGCCT GTCTGAAAGC 60
GAGGAGAGTG TGTTCTCAGG CCTGGAAGAT TCCGGCAGCG ACAGTAGTGA GGATGACCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	38.91	4.00e-108	385.00
IUUC-Atr-003141	Amborella trichopoda	42.35	2.00e-86	313.00
IUUC-Apl-003545	Anas platyrhynchos	63.24	0.00e+00	723.00
IUUC-Aly-005649	Arabidopsis lyrata	42.93	3.00e-143	502.00
IUUC-Ath-007625	Arabidopsis thaliana	42.86	5.00e-140	491.00
IUUC-Ago-007958	Ashbya gossypii	40.76	2.00e-146	513.00
IUUC-Acl-008344	Aspergillus clavatus	41.87	7.00e-126	444.00
IUUC-Afl-008616	Aspergillus flavus	39.74	3.00e-130	459.00
IUUC-Afu-009083	Aspergillus fumigatus	41.46	2.00e-125	443.00
IUUC-Ani-009365	Aspergillus nidulans	41.36	3.00e-129	456.00
IUUC-Ang-009796	Aspergillus niger	39.94	2.00e-124	439.00
IUUC-Aor-010015	Aspergillus oryzae	39.74	3.00e-130	459.00
IUUC-Ate-010537	Aspergillus terreus	40.75	4.00e-132	465.00
IUUC-Ame-011767	Astyanax mexicanus	61.28	3.00e-95	341.00
IUUC-Bgr-012286	Blumeria graminis	41.47	3.00e-134	472.00
IUUC-Bta-013569	Bos taurus	83.36	0.00e+00	1035.00
IUUC-Bci-013820	Botrytis cinerea	39.51	3.00e-127	449.00
IUUC-Bdi-014477	Brachypodium distachyon	43.62	3.00e-140	492.00
IUUC-Bol-016099	Brassica oleracea	43.11	8.00e-144	504.00
IUUC-Bra-017174	Brassica rapa	42.95	9.00e-144	504.00
IUUC-Cel-018201	Caenorhabditis elegans	45.96	3.00e-143	502.00
IUUC-Cja-019009	Callithrix jacchus	72.08	0.00e+00	882.00
IUUC-Cfa-020173	Canis familiaris	83.74	0.00e+00	1027.00
IUUC-Cpo-021796	Cavia porcellus	81.72	0.00e+00	1002.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.48	5.00e-139	488.00
IUUC-Csa-023440	Chlorocebus sabaeus	85.98	0.00e+00	1088.00
IUUC-Cin-025782	Ciona intestinalis	52.91	0.00e+00	698.00
IUUC-Csv-026352	Ciona savignyi	53.80	0.00e+00	689.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	38.69	2.00e-113	402.00
IUUC-Cne-027004	Cryptococcus neoformans	41.46	2.00e-154	540.00
IUUC-Cme-027242	Cyanidioschyzon merolae	37.02	3.00e-104	372.00
IUUC-Dre-028658	Danio rerio	68.40	0.00e+00	916.00
IUUC-Dno-028883	Dasypus novemcinctus	79.92	0.00e+00	1011.00
IUUC-Dor-031031	Dipodomys ordii	82.06	0.00e+00	1049.00
IUUC-Dse-031443	Dothistroma septosporum	37.96	7.00e-129	454.00
IUUC-Dme-031786	Drosophila melanogaster	51.02	0.00e+00	673.00
IUUC-Eca-033677	Equus caballus	85.53	0.00e+00	1072.00
IUUC-Eeu-035310	Erinaceus europaeus	85.96	0.00e+00	906.00
IUUC-Fca-035888	Felis catus	86.53	0.00e+00	1062.00
IUUC-Fal-037438	Ficedula albicollis	65.13	0.00e+00	674.00
IUUC-Fox-037973	Fusarium oxysporum	40.00	5.00e-141	494.00
IUUC-Fso-038187	Fusarium solani	39.76	5.00e-141	494.00
IUUC-Gmo-039114	Gadus morhua	61.75	0.00e+00	769.00
IUUC-Ggr-039746	Gaeumannomyces graminis	40.12	1.00e-135	476.00
IUUC-Gga-040631	Gallus gallus	66.96	4.00e-137	481.00
IUUC-Gac-042582	Gasterosteus aculeatus	64.71	0.00e+00	824.00
IUUC-Gma-044215	Glycine max	42.56	2.00e-139	489.00
IUUC-Ggo-045587	Gorilla gorilla	88.01	0.00e+00	1070.00
IUUC-Hsa-046319	Homo sapiens	86.28	0.00e+00	1090.00
IUUC-Hvu-047526	Hordeum vulgare	42.60	2.00e-130	459.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	83.75	0.00e+00	1023.00
IUUC-Kpa-049221	Komagataella pastoris	39.73	2.00e-135	476.00
IUUC-Lch-049640	Latimeria chalumnae	68.70	0.00e+00	938.00
IUUC-Lpe-051135	Leersia perrieri	40.23	4.00e-119	422.00
IUUC-Loc-051930	Lepisosteus oculatus	68.67	0.00e+00	907.00
IUUC-Lma-053290	Leptosphaeria maculans	41.09	1.00e-127	450.00
IUUC-Laf-053903	Loxodonta africana	75.21	0.00e+00	927.00
IUUC-Mcc-055471	Macaca mulatta	85.61	0.00e+00	1092.00
IUUC-Meu-056190	Macropus eugenii	80.03	0.00e+00	966.00
IUUC-Mor-057135	Magnaporthe oryzae	39.81	4.00e-127	449.00
IUUC-Mpo-057475	Magnaporthe poae	39.23	6.00e-125	441.00
IUUC-Mtr-058689	Medicago truncatula	39.14	4.00e-119	422.00
IUUC-Mla-059149	Melampsora laricipopulina	43.73	4.00e-156	545.00
IUUC-Mga-059645	Meleagris gallopavo	55.33	1.00e-79	289.00
IUUC-Mvi-060485	Microbotryum violaceum	41.89	3.00e-129	457.00
IUUC-Mmr-061674	Microcebus murinus	85.09	0.00e+00	1013.00
IUUC-Mdo-062973	Monodelphis domestica	77.13	0.00e+00	983.00
IUUC-Mmu-064180	Mus musculus	79.42	0.00e+00	1028.00
IUUC-Mac-064535	Musa acuminata	42.11	8.00e-97	348.00
IUUC-Mpu-066406	Mustela putorius furo	87.31	0.00e+00	1103.00
IUUC-Mlu-067795	Myotis lucifugus	85.63	0.00e+00	1025.00
IUUC-Nfi-068516	Neosartorya fischeri	41.18	4.00e-118	419.00
IUUC-Ncr-068767	Neurospora crassa	40.12	5.00e-122	431.00
IUUC-Opr-071084	Ochotona princeps	85.71	2.00e-141	494.00
IUUC-Ont-071614	Oreochromis niloticus	66.07	0.00e+00	858.00
IUUC-Oba-075980	Oryza barthii	40.29	4.00e-119	421.00
IUUC-Obr-076799	Oryza brachyantha	42.33	1.00e-132	466.00
IUUC-Ogl-077134	Oryza glaberrima	41.64	4.00e-127	448.00
IUUC-Ogu-078655	Oryza glumaepatula	40.19	7.00e-123	434.00
IUUC-Oin-079654	Oryza indica	42.03	6.00e-127	447.00
IUUC-Olo-080706	Oryza longistaminata	39.97	2.00e-119	422.00
IUUC-Ome-081716	Oryza meridionalis	37.50	1.00e-104	374.00
IUUC-Oni-082508	Oryza nivara	40.23	3.00e-119	422.00
IUUC-Opu-083707	Oryza punctata	39.81	2.00e-118	419.00
IUUC-Oru-084453	Oryza rufipogon	39.97	2.00e-119	422.00
IUUC-Osa-085811	Oryza sativa	41.64	5.00e-127	448.00
IUUC-Ola-087361	Oryzias latipes	66.93	0.00e+00	872.00
IUUC-Oga-088015	Otolemur garnettii	82.85	0.00e+00	1048.00
IUUC-Oar-090058	Ovis aries	56.95	5.00e-101	361.00
IUUC-Ptr-090631	Pan troglodytes	82.03	2.00e-136	478.00
IUUC-Pan-092306	Papio anubis	85.93	0.00e+00	1091.00
IUUC-Pma-094622	Petromyzon marinus	67.75	0.00e+00	892.00
IUUC-Pno-094794	Phaeosphaeria nodorum	37.73	5.00e-115	408.00
IUUC-Ppa-095528	Physcomitrella patens	43.56	4.00e-95	342.00
IUUC-Pfo-096682	Poecilia formosa	66.72	0.00e+00	890.00
IUUC-Pab-097939	Pongo abelii	86.85	0.00e+00	947.00
IUUC-Pop-099530	Populus trichocarpa	43.25	3.00e-127	448.00
IUUC-Pca-100333	Procavia capensis	82.22	0.00e+00	1035.00
IUUC-Ppe-102078	Prunus persica	42.14	2.00e-135	476.00
IUUC-Pgr-103525	Puccinia graminis	44.76	2.00e-148	519.00
IUUC-Ptt-103929	Puccinia triticina	44.15	3.00e-144	506.00
IUUC-Pte-104029	Pyrenophora teres	40.47	1.00e-134	473.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	40.62	4.00e-135	475.00
IUUC-Rno-105248	Rattus norvegicus	81.46	0.00e+00	1030.00
IUUC-Sce-106381	Saccharomyces cerevisiae	39.67	1.00e-139	490.00
IUUC-Sha-106519	Sarcophilus harrisii	79.45	0.00e+00	994.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	39.40	2.00e-124	439.00
IUUC-Spo-108071	Schizosaccharomyces pombe	38.51	2.00e-120	426.00
IUUC-Smo-109604	Selaginella moellendorffii	44.55	8.00e-140	491.00
IUUC-Sit-110551	Setaria italica	42.65	3.00e-133	469.00
IUUC-Sly-110970	Solanum lycopersicum	46.40	1.00e-80	293.00
IUUC-Stu-112593	Solanum tuberosum	43.11	6.00e-139	488.00
IUUC-Sar-113123	Sorex araneus	77.46	5.00e-127	447.00
IUUC-Sbi-113945	Sorghum bicolor	41.84	5.00e-135	474.00
IUUC-Sre-115188	Sporisorium reilianum	43.20	8.00e-146	511.00
IUUC-Ssc-115352	Sus scrofa	86.55	0.00e+00	1017.00
IUUC-Tru-117685	Takifugu rubripes	67.52	0.00e+00	884.00
IUUC-Tni-119982	Tetraodon nigroviridis	66.94	0.00e+00	824.00
IUUC-Tca-121664	Theobroma cacao	44.18	5.00e-145	508.00
IUUC-Tre-122229	Trichoderma reesei	41.07	3.00e-121	429.00
IUUC-Tvi-122576	Trichoderma virens	40.36	6.00e-126	444.00
IUUC-Tae-124110	Triticum aestivum	41.61	5.00e-121	428.00
IUUC-Tur-126781	Triticum urartu	39.24	2.00e-104	373.00
IUUC-Tme-127080	Tuber melanosporum	44.41	1.00e-157	550.00
IUUC-Ttr-128514	Tursiops truncatus	86.55	0.00e+00	788.00
IUUC-Uma-129556	Ustilago maydis	41.47	3.00e-137	482.00
IUUC-Vda-129715	Verticillium dahliae	40.25	1.00e-133	470.00
IUUC-Vvi-131211	Vitis vinifera	43.44	6.00e-136	478.00
IUUC-Xma-133883	Xiphophorus maculatus	67.09	0.00e+00	852.00
IUUC-Yli-134438	Yarrowia lipolytica	40.66	4.00e-125	442.00
IUUC-Zma-135341	Zea mays	37.74	3.00e-121	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence