iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.60e-09	36.7	255	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggede.kslveCekCrewfHpaClkls..veeelpnsekwiC 48
            C +C+++   + +s+  C +C+ +fH++Cl+++  v e+    +++ C
   Q: 255  QCQICRRSIVISlDSFFYCIQCSMVFHFECLEIPefVVEKSHHIHPLVC 303
           6*******9987459*******************886666666667888 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAELKHFSHE CPLTSPKIAV DGICSICYKD DLVELACSPC DFSLCKGCSQ LPQKVWHDFH 60
PDHPLEFCLH QYDQKPEHVV CSGCGNMTSG SFYKCKECEI YLDMGCALIA SIFRGWDSKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACTCCTCC CACTATCTTA AATCTAAAAA AAAAAACTTT GGATCTCATC TCTCGTTGAC 60
TTCGATGGCA GAGCTCAAGC ATTTCTCCCA TGAATGCCCA TTGACTTCAC CCAAGATCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004146--DC1
IPR002219--PE/DAG-bd
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50081--ZF_DAG_PE_2
PS01359--ZF_PHD_1

Pfam

PF03107--C1_2

SMART

SM00109--C1
SM00249--PHD

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0035556--P:intracellular signal transduction

KEGG

ath:AT2G21850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008089	Aspergillus clavatus	44.44	6.80e-01	28.90
IUUC-Afl-008472	Aspergillus flavus	44.44	6.30e-01	28.90
IUUC-Afu-009118	Aspergillus fumigatus	44.44	6.10e-01	28.90
IUUC-Ani-009217	Aspergillus nidulans	47.22	1.10e-01	30.80
IUUC-Ang-009697	Aspergillus niger	44.44	5.80e-01	29.30
IUUC-Aor-010089	Aspergillus oryzae	44.44	6.30e-01	28.90
IUUC-Ate-010418	Aspergillus terreus	47.22	1.50e-01	30.80
IUUC-Dse-031554	Dothistroma septosporum	33.33	2.10e+00	27.30
IUUC-Fox-037938	Fusarium oxysporum	44.44	8.60e-01	28.50
IUUC-Ggr-040011	Gaeumannomyces graminis	44.44	7.80e-01	28.90
IUUC-Mor-057091	Magnaporthe oryzae	44.44	7.80e-01	28.50
IUUC-Mpo-057513	Magnaporthe poae	44.44	7.00e-01	28.90
IUUC-Mla-059151	Melampsora laricipopulina	35.42	4.40e-01	29.30
IUUC-Ncr-068849	Neurospora crassa	44.44	6.90e-01	28.90
IUUC-Ppa-095495	Physcomitrella patens	26.42	9.00e-11	60.10
IUUC-Pte-104411	Pyrenophora teres	41.67	2.50e+00	26.90
IUUC-Stu-112155	Solanum tuberosum	32.98	7.00e-14	70.10
IUUC-Tvi-122448	Trichoderma virens	41.67	2.30e+00	26.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence