iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093683

Ensembl Protein ID

ENSPSIP00000019680.1

UniProt Accession

K7GHB9; K7GHB9_PELSI

Genbank Protein ID

ENSPSIP00000019680

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01152311

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000017455.1	ENSPSIT00000019772.1	ENSPSIP00000019680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-45	149.3	670	700
UBD/Beta-Prp	3.10e-96	322.1	24	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +v+cla+ ++ +++vs+s+D+++++W+
   Q: 670  GHHQEVWCLALsPNgDYVVSSSHDKSLRLWE 700
           78899*******777***************8 PP

UBD/Beta-Prp

   S: 53   aevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           + +  v++  ++  +v +   +++ +wd ++g+ v +l+g +++v+sl  sp+g +l++G +d  irv+ l +g+    t++gh+++v+
   Q: 24   GNIVYVTLRGEKGRYVAVPACEHVFIWDTRKGEKVLILQGLKHEVTSLCPSPDGLHLAVGYEDGSIRVFSLLSGEGKV-TFNGHKAAVM 111
           555555555565566666666777888999999999999999999999888888889999999999999998888888.8999999999 PP
   S: 142  cvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           ++++++ g  lvsGs+D+ v +Wd+ +++ l++l+g h+d+v+   f ++++ lv+ ++d+ vk wdl t++c +tl gh++ v+ ++f
   Q: 112  TLQYDQLGGRLVSGSKDTDVIIWDVINESGLYRLKG-HKDAVTQALFLREKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGLAF 199
           999999888899999999999999988999999988.9999999999999999999999999999999999999999999999999999 PP
   S: 231  spnderlvsgssDgsiriWdlrs 253
            ++++rl++g++D  +r+W+++ 
   Q: 200  VSEEKRLITGTADSELRVWNITY 222
           98999999999999999998764 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MGLTKQYLRY TASALFGVIA SQKGNIVYVT LRGEKGRYVA VPACEHVFIW DTRKGEKVLI 60
LQGLKHEVTS LCPSPDGLHL AVGYEDGSIR VFSLLSGEGK VTFNGHKAAV MTLQYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAGCCCCC ACCTGAAACT GGAAATTGCA CCATGGGTCT CACCAAGCAA TATCTGCGCT 60
ACACCGCCAG TGCACTGTTT GGGGTGATTG CTAGCCAGAA AGGCAACATC GTCTATGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

KEGG

pss:102449877

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	40.23	5.00e-150	525.00
IUUC-Aml-001245	Ailuropoda melanoleuca	83.53	0.00e+00	1489.00
IUUC-Atr-002700	Amborella trichopoda	38.77	1.00e-172	600.00
IUUC-Apl-004164	Anas platyrhynchos	84.36	0.00e+00	1137.00
IUUC-Aca-004765	Anolis carolinensis	79.81	0.00e+00	1467.00
IUUC-Aly-006503	Arabidopsis lyrata	39.42	3.00e-173	602.00
IUUC-Ath-006848	Arabidopsis thaliana	39.21	8.00e-177	613.00
IUUC-Ago-007909	Ashbya gossypii	36.11	6.00e-146	511.00
IUUC-Acl-008238	Aspergillus clavatus	37.51	2.00e-176	612.00
IUUC-Afl-008544	Aspergillus flavus	37.39	4.00e-172	598.00
IUUC-Afu-008868	Aspergillus fumigatus	37.68	2.00e-175	609.00
IUUC-Ani-009367	Aspergillus nidulans	37.23	7.00e-168	584.00
IUUC-Ang-009732	Aspergillus niger	37.25	2.00e-172	599.00
IUUC-Aor-010140	Aspergillus oryzae	37.46	9.00e-173	600.00
IUUC-Ate-010572	Aspergillus terreus	37.55	6.00e-173	601.00
IUUC-Ame-010956	Astyanax mexicanus	75.85	0.00e+00	832.00
IUUC-Bgr-012296	Blumeria graminis	35.96	4.00e-169	588.00
IUUC-Bta-012716	Bos taurus	82.48	0.00e+00	1504.00
IUUC-Bci-013699	Botrytis cinerea	35.92	7.00e-157	547.00
IUUC-Bdi-014525	Brachypodium distachyon	37.83	6.00e-162	564.00
IUUC-Bol-015117	Brassica oleracea	40.06	3.00e-172	598.00
IUUC-Bra-016869	Brassica rapa	40.06	3.00e-173	602.00
IUUC-Cel-018570	Caenorhabditis elegans	34.03	3.00e-131	462.00
IUUC-Cja-019425	Callithrix jacchus	81.78	0.00e+00	1464.00
IUUC-Cfa-020787	Canis familiaris	83.73	0.00e+00	1502.00
IUUC-Cpo-021729	Cavia porcellus	82.03	0.00e+00	1038.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.44	7.00e-105	374.00
IUUC-Csa-024098	Chlorocebus sabaeus	82.80	0.00e+00	1483.00
IUUC-Cho-024495	Choloepus hoffmanni	70.14	0.00e+00	825.00
IUUC-Cin-025245	Ciona intestinalis	48.29	8.00e-163	566.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	38.10	4.00e-166	578.00
IUUC-Cne-026835	Cryptococcus neoformans	45.38	7.00e-126	444.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.80	2.00e-38	154.00
IUUC-Dre-027874	Danio rerio	70.86	0.00e+00	1283.00
IUUC-Dno-028905	Dasypus novemcinctus	82.38	0.00e+00	1492.00
IUUC-Dor-030383	Dipodomys ordii	76.05	0.00e+00	719.00
IUUC-Dse-031297	Dothistroma septosporum	36.85	4.00e-164	571.00
IUUC-Dme-031956	Drosophila melanogaster	41.91	0.00e+00	677.00
IUUC-Ete-032608	Echinops telfairi	73.29	0.00e+00	814.00
IUUC-Eca-034181	Equus caballus	82.80	0.00e+00	1474.00
IUUC-Eeu-034495	Erinaceus europaeus	82.49	0.00e+00	1438.00
IUUC-Fca-035994	Felis catus	84.12	0.00e+00	1414.00
IUUC-Fal-036611	Ficedula albicollis	83.53	0.00e+00	1409.00
IUUC-Fox-037807	Fusarium oxysporum	37.11	5.00e-166	578.00
IUUC-Fso-038090	Fusarium solani	36.49	5.00e-162	564.00
IUUC-Gmo-039018	Gadus morhua	62.45	0.00e+00	683.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.41	2.00e-167	583.00
IUUC-Gga-040707	Gallus gallus	85.00	0.00e+00	1437.00
IUUC-Gac-042334	Gasterosteus aculeatus	61.45	0.00e+00	662.00
IUUC-Gma-043860	Glycine max	37.75	3.00e-169	588.00
IUUC-Ggo-045334	Gorilla gorilla	82.84	0.00e+00	1455.00
IUUC-Hsa-046996	Homo sapiens	82.91	0.00e+00	1457.00
IUUC-Hvu-047381	Hordeum vulgare	34.89	3.00e-89	322.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	82.80	0.00e+00	1475.00
IUUC-Kpa-049185	Komagataella pastoris	34.54	5.00e-151	528.00
IUUC-Lch-050098	Latimeria chalumnae	68.68	0.00e+00	1149.00
IUUC-Lpe-050710	Leersia perrieri	37.62	1.00e-163	570.00
IUUC-Loc-052745	Lepisosteus oculatus	68.97	0.00e+00	1206.00
IUUC-Lma-053104	Leptosphaeria maculans	37.73	7.00e-171	595.00
IUUC-Laf-054395	Loxodonta africana	82.06	0.00e+00	1464.00
IUUC-Mcc-055077	Macaca mulatta	83.12	0.00e+00	1481.00
IUUC-Meu-056418	Macropus eugenii	79.06	0.00e+00	708.00
IUUC-Mor-057031	Magnaporthe oryzae	37.24	8.00e-151	527.00
IUUC-Mpo-057420	Magnaporthe poae	37.79	9.00e-168	583.00
IUUC-Mtr-057838	Medicago truncatula	38.88	2.00e-180	625.00
IUUC-Mla-058854	Melampsora laricipopulina	34.80	3.00e-152	532.00
IUUC-Mga-060120	Meleagris gallopavo	80.92	0.00e+00	1322.00
IUUC-Mvi-060407	Microbotryum violaceum	42.67	1.00e-135	477.00
IUUC-Mmr-060635	Microcebus murinus	81.83	0.00e+00	1459.00
IUUC-Mdo-063023	Monodelphis domestica	82.40	0.00e+00	1506.00
IUUC-Mmu-064103	Mus musculus	80.77	0.00e+00	1464.00
IUUC-Mac-065569	Musa acuminata	38.12	2.00e-171	595.00
IUUC-Mpu-066462	Mustela putorius furo	83.62	0.00e+00	1514.00
IUUC-Mlu-067894	Myotis lucifugus	82.38	0.00e+00	1495.00
IUUC-Nfi-068321	Neosartorya fischeri	37.67	3.00e-174	605.00
IUUC-Ncr-068661	Neurospora crassa	37.10	2.00e-166	579.00
IUUC-Nle-069409	Nomascus leucogenys	83.12	0.00e+00	1466.00
IUUC-Opr-070445	Ochotona princeps	80.21	0.00e+00	900.00
IUUC-Ont-072339	Oreochromis niloticus	69.56	0.00e+00	1239.00
IUUC-Oan-073688	Ornithorhynchus anatinus	75.16	0.00e+00	1342.00
IUUC-Ocu-074227	Oryctolagus cuniculus	82.91	0.00e+00	1505.00
IUUC-Oba-075635	Oryza barthii	37.53	9.00e-160	557.00
IUUC-Obr-076897	Oryza brachyantha	38.57	6.00e-168	584.00
IUUC-Ogl-077555	Oryza glaberrima	37.42	2.00e-159	556.00
IUUC-Ogu-078724	Oryza glumaepatula	37.33	1.00e-159	557.00
IUUC-Oin-080030	Oryza indica	37.33	1.00e-158	553.00
IUUC-Olo-080687	Oryza longistaminata	35.47	6.00e-147	514.00
IUUC-Ome-081867	Oryza meridionalis	37.43	2.00e-159	556.00
IUUC-Oni-082559	Oryza nivara	37.33	8.00e-159	554.00
IUUC-Opu-083332	Oryza punctata	39.19	9.00e-153	534.00
IUUC-Oru-084455	Oryza rufipogon	37.33	6.00e-159	554.00
IUUC-Osa-085793	Oryza sativa	37.33	6.00e-159	554.00
IUUC-Ola-087395	Oryzias latipes	68.00	0.00e+00	1137.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.66	7.00e-158	550.00
IUUC-Oga-088574	Otolemur garnettii	82.27	0.00e+00	1488.00
IUUC-Oar-089453	Ovis aries	81.04	0.00e+00	1491.00
IUUC-Ptr-090694	Pan troglodytes	82.91	0.00e+00	1457.00
IUUC-Pan-092420	Papio anubis	82.73	0.00e+00	1472.00
IUUC-Pma-094197	Petromyzon marinus	57.46	1.00e-71	261.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.62	2.00e-165	575.00
IUUC-Ppa-095208	Physcomitrella patens	39.98	2.00e-176	612.00
IUUC-Pfo-096299	Poecilia formosa	68.94	0.00e+00	1240.00
IUUC-Pab-098706	Pongo abelii	83.21	0.00e+00	1465.00
IUUC-Pop-099275	Populus trichocarpa	39.37	2.00e-174	606.00
IUUC-Pca-100796	Procavia capensis	68.32	0.00e+00	1092.00
IUUC-Ppe-101861	Prunus persica	39.62	9.00e-176	610.00
IUUC-Pva-103241	Pteropus vampyrus	77.31	0.00e+00	1325.00
IUUC-Pgr-103432	Puccinia graminis	37.52	8.00e-162	564.00
IUUC-Ptt-103742	Puccinia triticina	42.03	7.00e-113	401.00
IUUC-Pte-104069	Pyrenophora teres	36.63	2.00e-159	556.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.69	7.00e-166	577.00
IUUC-Rno-105219	Rattus norvegicus	80.66	0.00e+00	1422.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.99	4.00e-157	548.00
IUUC-Sha-107550	Sarcophilus harrisii	82.45	0.00e+00	1504.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	37.43	1.00e-158	553.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.09	8.00e-166	577.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.63	8.00e-165	574.00
IUUC-Smo-108974	Selaginella moellendorffii	39.76	4.00e-174	605.00
IUUC-Sit-110000	Setaria italica	39.14	6.00e-160	558.00
IUUC-Sly-111595	Solanum lycopersicum	38.75	7.00e-177	614.00
IUUC-Stu-112516	Solanum tuberosum	38.64	7.00e-176	610.00
IUUC-Sar-113195	Sorex araneus	74.24	0.00e+00	1182.00
IUUC-Sbi-114465	Sorghum bicolor	37.28	6.00e-165	574.00
IUUC-Sre-115006	Sporisorium reilianum	35.52	6.00e-148	518.00
IUUC-Ssc-115929	Sus scrofa	81.74	0.00e+00	1458.00
IUUC-Tgu-117282	Taeniopygia guttata	83.70	0.00e+00	1402.00
IUUC-Tru-118406	Takifugu rubripes	68.36	0.00e+00	1185.00
IUUC-Tsy-119170	Tarsius syrichta	80.72	0.00e+00	1464.00
IUUC-Tni-119721	Tetraodon nigroviridis	66.38	0.00e+00	1162.00
IUUC-Tca-121761	Theobroma cacao	39.72	4.00e-179	621.00
IUUC-Tre-121908	Trichoderma reesei	35.83	2.00e-163	569.00
IUUC-Tvi-122547	Trichoderma virens	36.48	7.00e-166	577.00
IUUC-Tae-125496	Triticum aestivum	38.70	8.00e-164	570.00
IUUC-Tur-126811	Triticum urartu	39.88	5.00e-163	568.00
IUUC-Tme-126987	Tuber melanosporum	39.20	3.00e-178	618.00
IUUC-Tbe-127315	Tupaia belangeri	86.17	0.00e+00	808.00
IUUC-Ttr-129165	Tursiops truncatus	73.78	0.00e+00	1261.00
IUUC-Uma-129651	Ustilago maydis	34.88	1.00e-148	520.00
IUUC-Vda-129973	Verticillium dahliae	37.31	4.00e-160	558.00
IUUC-Vpa-130163	Vicugna pacos	71.84	4.00e-178	618.00
IUUC-Vvi-131402	Vitis vinifera	39.03	1.00e-178	620.00
IUUC-Xtr-132296	Xenopus tropicalis	74.59	0.00e+00	1323.00
IUUC-Xma-133028	Xiphophorus maculatus	69.01	0.00e+00	1248.00
IUUC-Yli-134484	Yarrowia lipolytica	37.74	4.00e-152	531.00
IUUC-Zma-135938	Zea mays	36.80	5.00e-164	571.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence