iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006050

Ensembl Protein ID

scaffold_403755.1

UniProt Accession

D7LHC3; D7LHC3_ARALL

Genbank Protein ID

EFH58391.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_904254

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_403755.1	scaffold_403755.1	scaffold_403755.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-15	57.4	78	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvl 35
           gH+d v+ +af      s + l s+s Dgti+ WD+r++ +
   Q: 78   GHSDTVNQIAFssdsaaSPHVLHSCSSDGTIRSWDTRSFQQ 118
           8***********8877532679*************999876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEEASSEMEV EVQNRQLSDS SSAQNVGLKN SIQTNFGSDY VFQIVPKIDW TAIAVSLSTN 60
TVKLYSPVTG QYYGECKGHS DTVNQIAFSS DSAASPHVLH SCSSDGTIRS WDTRSFQQVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTGATTTC GCTCAAACCA ATGGAAGAAG CGTCGTCGGA GATGGAAGTG GAGGTGCAAA 60
ATCGCCAGCT TTCGGATTCT TCTTCAGCTC AAAACGTTGG GCTCAAGAAC TCTATTCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0040008--P:regulation of growth
GO:0010029--P:regulation of seed germination

KEGG

aly:ARALYDRAFT_904254

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000596	Aegilops tauschii	57.07	4.00e-129	453.00
IUUC-Aml-001254	Ailuropoda melanoleuca	27.76	2.00e-23	102.00
IUUC-Atr-003047	Amborella trichopoda	55.04	2.00e-105	374.00
IUUC-Apl-003479	Anas platyrhynchos	30.15	2.00e-25	108.00
IUUC-Aca-004537	Anolis carolinensis	26.99	2.00e-20	92.40
IUUC-Ath-007363	Arabidopsis thaliana	93.95	0.00e+00	705.00
IUUC-Ago-007711	Ashbya gossypii	27.03	6.00e-16	77.80
IUUC-Acl-008076	Aspergillus clavatus	25.00	1.00e-10	60.10
IUUC-Ani-009327	Aspergillus nidulans	34.38	7.00e-14	70.90
IUUC-Ang-009652	Aspergillus niger	27.22	1.00e-14	73.20
IUUC-Aor-009897	Aspergillus oryzae	34.15	1.00e-13	69.30
IUUC-Ate-010435	Aspergillus terreus	25.49	3.00e-12	65.50
IUUC-Ame-011078	Astyanax mexicanus	30.17	1.00e-19	90.10
IUUC-Bgr-012252	Blumeria graminis	28.25	4.00e-16	78.20
IUUC-Bta-012703	Bos taurus	25.13	1.00e-21	96.70
IUUC-Bdi-014266	Brachypodium distachyon	56.91	5.00e-114	403.00
IUUC-Bol-015632	Brassica oleracea	81.25	7.00e-93	332.00
IUUC-Bra-016730	Brassica rapa	82.43	0.00e+00	627.00
IUUC-Cja-019235	Callithrix jacchus	28.48	7.00e-23	100.00
IUUC-Cfa-020750	Canis familiaris	27.76	8.00e-23	100.00
IUUC-Cpo-021566	Cavia porcellus	28.70	3.00e-22	98.60
IUUC-Csa-023742	Chlorocebus sabaeus	29.19	2.00e-23	102.00
IUUC-Cho-024447	Choloepus hoffmanni	29.33	1.00e-19	90.10
IUUC-Cgl-026483	Colletotrichum gloeosporioides	29.77	7.00e-11	60.80
IUUC-Cne-026996	Cryptococcus neoformans	26.70	6.00e-08	51.60
IUUC-Dre-028760	Danio rerio	29.51	6.00e-23	100.00
IUUC-Dno-028909	Dasypus novemcinctus	26.26	6.00e-24	104.00
IUUC-Dor-030224	Dipodomys ordii	30.81	1.00e-20	92.80
IUUC-Dse-031410	Dothistroma septosporum	27.59	4.00e-15	74.70
IUUC-Eca-034117	Equus caballus	27.52	5.00e-23	101.00
IUUC-Eeu-035227	Erinaceus europaeus	28.88	2.00e-24	105.00
IUUC-Fca-036221	Felis catus	29.09	1.00e-23	103.00
IUUC-Fal-037285	Ficedula albicollis	28.03	7.00e-19	87.40
IUUC-Ggr-040120	Gaeumannomyces graminis	27.43	4.00e-10	58.20
IUUC-Gga-041255	Gallus gallus	30.08	8.00e-25	107.00
IUUC-Gma-044345	Glycine max	66.41	7.00e-149	519.00
IUUC-Ggo-045118	Gorilla gorilla	29.10	6.00e-25	107.00
IUUC-Hsa-046961	Homo sapiens	29.10	8.00e-25	107.00
IUUC-Hvu-047219	Hordeum vulgare	59.79	2.00e-129	454.00
IUUC-Itr-048310	Ictidomys tridecemlineatus	26.13	1.00e-26	113.00
IUUC-Kpa-049122	Komagataella pastoris	25.23	1.00e-14	73.60
IUUC-Lch-050390	Latimeria chalumnae	28.83	1.00e-18	86.70
IUUC-Loc-052076	Lepisosteus oculatus	29.89	3.00e-22	98.60
IUUC-Lma-053270	Leptosphaeria maculans	26.76	5.00e-15	74.70
IUUC-Laf-054241	Loxodonta africana	27.24	1.00e-24	106.00
IUUC-Mcc-055445	Macaca mulatta	28.92	2.00e-24	105.00
IUUC-Meu-056701	Macropus eugenii	34.55	1.00e-18	85.90
IUUC-Mor-056911	Magnaporthe oryzae	24.88	3.00e-11	61.60
IUUC-Mpo-057525	Magnaporthe poae	29.71	2.00e-11	62.80
IUUC-Mtr-058036	Medicago truncatula	66.58	3.00e-150	523.00
IUUC-Mla-058923	Melampsora laricipopulina	29.46	9.00e-15	73.90
IUUC-Mga-059779	Meleagris gallopavo	28.88	1.00e-23	103.00
IUUC-Mvi-060394	Microbotryum violaceum	27.82	2.00e-17	82.40
IUUC-Mmr-061573	Microcebus murinus	27.86	1.00e-24	106.00
IUUC-Mdo-062961	Monodelphis domestica	28.99	2.00e-28	119.00
IUUC-Mmu-063554	Mus musculus	28.09	1.00e-23	103.00
IUUC-Mac-064862	Musa acuminata	60.86	7.00e-130	456.00
IUUC-Mpu-066725	Mustela putorius furo	28.01	3.00e-23	101.00
IUUC-Mlu-067095	Myotis lucifugus	26.69	2.00e-24	105.00
IUUC-Nfi-068488	Neosartorya fischeri	26.46	1.00e-12	66.20
IUUC-Ncr-068709	Neurospora crassa	27.27	2.00e-11	62.80
IUUC-Nle-069614	Nomascus leucogenys	28.00	6.00e-24	104.00
IUUC-Opr-070604	Ochotona princeps	26.51	8.00e-22	97.40
IUUC-Ont-071684	Oreochromis niloticus	28.29	2.00e-22	99.00
IUUC-Oan-073074	Ornithorhynchus anatinus	29.54	8.00e-26	110.00
IUUC-Ocu-074393	Oryctolagus cuniculus	27.47	5.00e-22	97.80
IUUC-Oba-075342	Oryza barthii	60.05	1.00e-115	408.00
IUUC-Obr-076370	Oryza brachyantha	61.41	7.00e-124	436.00
IUUC-Ogl-077049	Oryza glaberrima	61.41	1.00e-119	422.00
IUUC-Ogu-078466	Oryza glumaepatula	60.33	1.00e-115	409.00
IUUC-Oin-080214	Oryza indica	54.62	1.00e-95	342.00
IUUC-Olo-080978	Oryza longistaminata	54.62	1.00e-95	342.00
IUUC-Ome-081321	Oryza meridionalis	59.24	2.00e-111	395.00
IUUC-Oni-082345	Oryza nivara	60.05	3.00e-115	407.00
IUUC-Opu-083337	Oryza punctata	60.33	1.00e-115	408.00
IUUC-Oru-085094	Oryza rufipogon	60.33	1.00e-115	409.00
IUUC-Osa-085382	Oryza sativa	59.43	4.00e-60	223.00
IUUC-Ola-087540	Oryzias latipes	29.18	4.00e-24	104.00
IUUC-Oga-088329	Otolemur garnettii	28.05	9.00e-21	94.00
IUUC-Oar-089413	Ovis aries	25.32	3.00e-21	95.50
IUUC-Ptr-090534	Pan troglodytes	29.41	2.00e-25	109.00
IUUC-Pan-092581	Papio anubis	29.50	5.00e-25	107.00
IUUC-Psi-093812	Pelodiscus sinensis	28.79	7.00e-27	114.00
IUUC-Ppa-095216	Physcomitrella patens	48.28	4.00e-94	337.00
IUUC-Pab-098114	Pongo abelii	28.17	9.00e-25	107.00
IUUC-Pop-099394	Populus trichocarpa	69.29	4.00e-154	536.00
IUUC-Pca-100968	Procavia capensis	27.96	2.00e-22	99.40
IUUC-Ppe-101385	Prunus persica	61.92	6.00e-118	416.00
IUUC-Pva-102164	Pteropus vampyrus	28.22	1.00e-22	100.00
IUUC-Pgr-103524	Puccinia graminis	26.79	3.00e-16	78.60
IUUC-Ptt-103863	Puccinia triticina	27.27	3.00e-13	68.20
IUUC-Rno-105066	Rattus norvegicus	27.63	1.00e-25	110.00
IUUC-Sce-106334	Saccharomyces cerevisiae	25.55	4.00e-14	71.60
IUUC-Sha-107540	Sarcophilus harrisii	31.33	2.00e-24	106.00
IUUC-Sja-107890	Schizosaccharomyces japonicus	26.54	1.00e-13	69.70
IUUC-Spo-108342	Schizosaccharomyces pombe	32.12	2.00e-11	62.40
IUUC-Smo-108767	Selaginella moellendorffii	47.25	1.00e-83	302.00
IUUC-Sit-110267	Setaria italica	58.16	1.00e-128	452.00
IUUC-Sly-111439	Solanum lycopersicum	61.44	1.00e-139	488.00
IUUC-Stu-112664	Solanum tuberosum	61.18	3.00e-138	483.00
IUUC-Sar-113388	Sorex araneus	27.66	2.00e-22	99.00
IUUC-Sbi-114679	Sorghum bicolor	60.70	8.00e-124	436.00
IUUC-Ssc-115311	Sus scrofa	26.67	3.00e-21	95.10
IUUC-Tgu-116672	Taeniopygia guttata	28.45	7.00e-19	87.40
IUUC-Tru-117689	Takifugu rubripes	27.98	2.00e-25	108.00
IUUC-Tsy-119627	Tarsius syrichta	26.99	2.00e-20	92.40
IUUC-Tni-120137	Tetraodon nigroviridis	28.80	2.00e-25	109.00
IUUC-Tca-120958	Theobroma cacao	70.08	4.00e-161	560.00
IUUC-Tre-122133	Trichoderma reesei	29.68	4.00e-11	61.20
IUUC-Tvi-122387	Trichoderma virens	28.02	9.00e-12	63.50
IUUC-Tae-125823	Triticum aestivum	57.04	2.00e-129	455.00
IUUC-Ttr-128539	Tursiops truncatus	27.88	3.00e-22	98.60
IUUC-Vpa-130315	Vicugna pacos	25.65	2.00e-20	92.80
IUUC-Vvi-131262	Vitis vinifera	67.62	5.00e-152	529.00
IUUC-Xtr-132190	Xenopus tropicalis	29.63	1.00e-25	109.00
IUUC-Yli-134492	Yarrowia lipolytica	26.56	7.00e-11	61.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence