iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058717

Ensembl Protein ID

KEH24377

UniProt Accession

A0A072U3X0; A0A072U3X0_MEDTR

Genbank Protein ID

KEH24377.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g108870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g108870	KEH24377	KEH24377

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-17	63.8	70	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt+ ++ + f   s+ ++l+s+s Dgti+ WD+rt+ +
   Q: 70   GHTATINQILFsghSNpNILSSCSSDGTIRTWDTRTFQQ 108
           8************9778******************9876 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDVEEQRPFP IPNNVKRFGL KNSIQTNFGD DYVFQIIPKD DWSSMAVSLS TNAVKLYSPV 60
MGQYYGECKG HTATINQILF SGHSNPNILS SCSSDGTIRT WDTRTFQQVS IINAGPSQEI 120

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Nucleotide Sequence
(Fasta)

AAAAAAAGTG AGGTTATTGA GCTTTGCTTA ACTGGACCTC GTCTTAGTTA GCTGATCAGA 60
GCCCTAAAAC CCTTTTCTTC CTCCGCAATT GCACCTTCAT AGAAACAGTC ACAAACAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008448	Aspergillus flavus	31.17	8.00e-13	68.20
IUUC-Afu-008794	Aspergillus fumigatus	26.97	5.00e-07	47.80
IUUC-Aor-009897	Aspergillus oryzae	32.05	2.00e-13	68.90
IUUC-Dor-030224	Dipodomys ordii	31.58	4.00e-22	97.40
IUUC-Ggr-040120	Gaeumannomyces graminis	28.57	3.00e-13	68.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence