iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113826

Ensembl Protein ID

Sb02g000850.1

UniProt Accession

C5X781; C5X781_SORBI

Genbank Protein ID

EER97839.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G007300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g000850	Sb02g000850.1	Sb02g000850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-16	59.9	29	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           ++++++++f   d ++lv++sdD  i+++D+ + v+l
   Q: 29   NGRISSMDFhrKDtKYLVTASDDEAIRLYDTQDAVCL 65
           6789*******666******************99997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTSLPRVSME ITDEVVKSMK IGLVFQGYNG RISSMDFHRK DTKYLVTASD DEAIRLYDTQ 60
DAVCLNTINS KKYGAELVCF TDNPSIVLYS SNNGWDESLR LLSMNDNRFI RYYKGHIDRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAAGTC TACCTAGGGT GAGCATGGAG ATCACCGATG AGGTGGTCAA GAGCATGAAG 60
ATAGGGCTGG TCTTCCAAGG CTATGTAAGC CTTTGTTCTT CTTCCAAATT ACCCATGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0080182--P:histone H3-K4 trimethylation

KEGG

sbi:SORBI_02g000850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007804	Ashbya gossypii	31.55	1.00e-35	142.00
IUUC-Acl-008217	Aspergillus clavatus	29.33	1.00e-38	152.00
IUUC-Afl-008539	Aspergillus flavus	32.25	8.00e-37	146.00
IUUC-Afu-009105	Aspergillus fumigatus	31.07	6.00e-41	160.00
IUUC-Ani-009474	Aspergillus nidulans	30.90	8.00e-37	146.00
IUUC-Ang-009858	Aspergillus niger	29.79	2.00e-39	155.00
IUUC-Aor-009955	Aspergillus oryzae	32.25	8.00e-37	146.00
IUUC-Ate-010364	Aspergillus terreus	31.40	2.00e-40	159.00
IUUC-Bci-013966	Botrytis cinerea	29.32	1.00e-32	132.00
IUUC-Cme-027288	Cyanidioschyzon merolae	29.65	1.00e-41	162.00
IUUC-Ggr-040090	Gaeumannomyces graminis	28.48	3.00e-34	138.00
IUUC-Kpa-049249	Komagataella pastoris	29.77	1.00e-38	152.00
IUUC-Lma-053026	Leptosphaeria maculans	28.83	1.00e-34	139.00
IUUC-Mpo-057502	Magnaporthe poae	29.14	9.00e-35	140.00
IUUC-Mla-058815	Melampsora laricipopulina	31.83	7.00e-42	163.00
IUUC-Nfi-068284	Neosartorya fischeri	31.07	8.00e-41	160.00
IUUC-Spo-108128	Schizosaccharomyces pombe	28.89	1.00e-31	129.00
IUUC-Sre-115157	Sporisorium reilianum	28.53	2.00e-34	139.00
IUUC-Tvi-122471	Trichoderma virens	28.79	3.00e-26	111.00
IUUC-Tbe-127310	Tupaia belangeri	33.33	2.00e-14	72.40
IUUC-Vda-129826	Verticillium dahliae	31.08	4.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence