iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-084522

Ensembl Protein ID

ORUFI04G29000.1

UniProt Accession

A0A0E0PEV4; A0A0E0PEV4_ORYRU

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI04G29000	ORUFI04G29000.1	ORUFI04G29000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-82	278.7	183	548

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..........kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs 85
           Gl+NlgNtC+mNSvLQ+L++ p+lr+++l           +++ + +  + +++ ++l++ l ++ ++  +++++ +sp ++l + ++ a+++ 
   Q: 183  GLNNLGNTCFMNSVLQALLHAPPLRNYFLGdrhnrylcprQTPMRRRSAEANDKAACLACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLA 276
           9*****************************88777766553333333333378899************************************** PP
   S: 86   gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           +yeqqDa+Ef+  +ld+++e++k                  +++++  +     ++ +++F g l+s+++c +c+ +s+++ep +d+sl++   
   Q: 277  SYEQQDAHEFFISILDHIHENIK-----------------DDQHKSHAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAG 353
           **********************2.................23445566667777999***********************************87 PP
   S: 180  eetkke.......................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekin 250
            ++++                        +l  cLe ft++e+l+ e+k++ce+ck++qe+ k++++++lP v ++h+kRf+ s+ +k+++k++
   Q: 354  YNNSLGvanpkvhvrngerssggtntkvsTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVD 447
           7654448899999********************************************************************************* PP
   S: 251  kkvefpleLdlspfcts.................peekqke......kkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeee 321
            +++fp +Ld++p+++s                 +            + ++e++av+ HsG+l+ GHYv+y +  +++W+++dD  Vt v+e++
   Q: 448  HCLQFPFSLDMAPYLSSsilrsrfgnrifpseasD-----AdsvsefSSEFEIFAVITHSGKLEAGHYVTYLRL-NNHWYKCDDAWVTRVEEHT 535
           *****************777777777777655441.....14556669**************************.888**************** PP
   S: 322  vleetgstaYvlfYkr 337
           v +   s+aY+lfY +
   Q: 536  VRT---SQAYMLFYVQ 548
           ***...********76 PP

Organism

Oryza rufipogon

Protein Sequence
(Fasta)

MTTPSAPPPC PHLAAYRHTT RSLRFLRRCL RVRPLGRPEI RREPRELPRC SPCSSPTSSS 60
SRLYACLSCA AVFCPTHAAS HASASTSGGH QIAVDVDRAE LFCGACGDQV YDPDFDHAVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGATGACCA CCCCGTCCGC GCCGCCGCCG TGCCCGCACC TCGCCGCGTA CCGCCACACC 60
ACGCGCTCCC TCCGCTTCCT CCGCCGCTGC CTCCGCGTCC GCCCGCTCGG CCGCCCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000393	Aegilops tauschii	84.93	0.00e+00	652.00
IUUC-Aml-001343	Ailuropoda melanoleuca	34.11	7.00e-85	307.00
IUUC-Atr-002653	Amborella trichopoda	57.80	1.00e-174	605.00
IUUC-Apl-003433	Anas platyrhynchos	36.22	6.00e-87	313.00
IUUC-Aca-005347	Anolis carolinensis	36.09	1.00e-86	313.00
IUUC-Aly-006565	Arabidopsis lyrata	54.12	1.00e-123	436.00
IUUC-Ath-007536	Arabidopsis thaliana	53.70	4.00e-123	434.00
IUUC-Ago-007811	Ashbya gossypii	26.46	1.00e-42	166.00
IUUC-Acl-008124	Aspergillus clavatus	29.96	4.00e-54	204.00
IUUC-Afl-008464	Aspergillus flavus	31.88	1.00e-49	189.00
IUUC-Afu-008912	Aspergillus fumigatus	30.49	2.00e-54	206.00
IUUC-Ani-009168	Aspergillus nidulans	31.90	5.00e-54	204.00
IUUC-Ang-009694	Aspergillus niger	31.19	5.00e-55	207.00
IUUC-Aor-010035	Aspergillus oryzae	33.45	1.00e-37	149.00
IUUC-Ate-010382	Aspergillus terreus	32.80	1.00e-49	189.00
IUUC-Ame-011253	Astyanax mexicanus	33.40	9.00e-72	263.00
IUUC-Bgr-012150	Blumeria graminis	29.50	1.00e-44	173.00
IUUC-Bta-013303	Bos taurus	34.64	5.00e-87	314.00
IUUC-Bci-013604	Botrytis cinerea	29.32	9.00e-54	204.00
IUUC-Bdi-014171	Brachypodium distachyon	86.27	0.00e+00	860.00
IUUC-Bol-016509	Brassica oleracea	49.10	2.00e-123	436.00
IUUC-Bra-016962	Brassica rapa	50.60	2.00e-117	415.00
IUUC-Cja-019283	Callithrix jacchus	37.15	1.00e-84	306.00
IUUC-Cfa-021239	Canis familiaris	36.25	1.00e-85	310.00
IUUC-Cpo-022354	Cavia porcellus	34.77	9.00e-89	320.00
IUUC-Csa-023145	Chlorocebus sabaeus	34.95	4.00e-88	318.00
IUUC-Cho-024863	Choloepus hoffmanni	30.12	2.00e-28	119.00
IUUC-Cin-025109	Ciona intestinalis	35.07	6.00e-56	210.00
IUUC-Csv-026214	Ciona savignyi	31.91	2.00e-68	253.00
IUUC-Cgl-026457	Colletotrichum gloeosporioides	28.63	1.00e-51	197.00
IUUC-Cne-027085	Cryptococcus neoformans	30.06	1.00e-56	214.00
IUUC-Dre-027433	Danio rerio	36.33	1.00e-84	306.00
IUUC-Dno-030095	Dasypus novemcinctus	36.65	1.00e-86	312.00
IUUC-Dor-030832	Dipodomys ordii	39.13	7.00e-36	144.00
IUUC-Dse-031415	Dothistroma septosporum	30.57	6.00e-65	241.00
IUUC-Dme-032074	Drosophila melanogaster	32.49	1.00e-66	246.00
IUUC-Ete-033175	Echinops telfairi	27.84	2.00e-43	169.00
IUUC-Eca-033736	Equus caballus	36.25	2.00e-85	308.00
IUUC-Eeu-035268	Erinaceus europaeus	25.96	2.00e-28	120.00
IUUC-Fca-035861	Felis catus	36.45	4.00e-86	311.00
IUUC-Fal-037645	Ficedula albicollis	36.22	5.00e-87	314.00
IUUC-Fox-038046	Fusarium oxysporum	27.97	1.00e-46	180.00
IUUC-Fso-038321	Fusarium solani	27.41	1.00e-45	176.00
IUUC-Gmo-038474	Gadus morhua	40.72	2.00e-59	222.00
IUUC-Ggr-040044	Gaeumannomyces graminis	27.47	4.00e-47	181.00
IUUC-Gga-040624	Gallus gallus	36.22	7.00e-87	313.00
IUUC-Gac-042197	Gasterosteus aculeatus	33.27	3.00e-82	298.00
IUUC-Gma-042897	Glycine max	60.10	0.00e+00	641.00
IUUC-Ggo-044409	Gorilla gorilla	34.82	4.00e-88	318.00
IUUC-Hsa-046521	Homo sapiens	34.82	4.00e-88	318.00
IUUC-Hvu-047739	Hordeum vulgare	87.03	0.00e+00	676.00
IUUC-Itr-048375	Ictidomys tridecemlineatus	35.00	6.00e-88	317.00
IUUC-Kpa-049135	Komagataella pastoris	29.36	2.00e-54	205.00
IUUC-Lch-050537	Latimeria chalumnae	34.64	2.00e-87	315.00
IUUC-Lpe-050969	Leersia perrieri	93.11	0.00e+00	734.00
IUUC-Loc-052765	Lepisosteus oculatus	31.37	9.00e-68	250.00
IUUC-Lma-053105	Leptosphaeria maculans	31.85	3.00e-53	202.00
IUUC-Laf-053571	Loxodonta africana	36.25	4.00e-86	311.00
IUUC-Mcc-055166	Macaca mulatta	34.95	4.00e-88	318.00
IUUC-Mor-057103	Magnaporthe oryzae	27.03	4.00e-52	198.00
IUUC-Mpo-057621	Magnaporthe poae	27.27	6.00e-46	177.00
IUUC-Mtr-057769	Medicago truncatula	58.33	2.00e-179	621.00
IUUC-Mla-059185	Melampsora laricipopulina	29.46	6.00e-39	154.00
IUUC-Mga-059709	Meleagris gallopavo	36.22	6.00e-87	313.00
IUUC-Mvi-060530	Microbotryum violaceum	34.05	2.00e-51	196.00
IUUC-Mmr-060988	Microcebus murinus	35.00	6.00e-88	317.00
IUUC-Mdo-063065	Monodelphis domestica	34.46	3.00e-87	315.00
IUUC-Mmu-063829	Mus musculus	34.88	3.00e-87	315.00
IUUC-Mac-065419	Musa acuminata	53.70	6.00e-148	516.00
IUUC-Mpu-066687	Mustela putorius furo	34.71	5.00e-86	311.00
IUUC-Mlu-067330	Myotis lucifugus	34.12	1.00e-83	303.00
IUUC-Nfi-068423	Neosartorya fischeri	30.13	2.00e-54	206.00
IUUC-Ncr-068809	Neurospora crassa	27.16	3.00e-51	196.00
IUUC-Nle-069084	Nomascus leucogenys	36.06	6.00e-80	290.00
IUUC-Opr-070469	Ochotona princeps	36.51	4.00e-61	228.00
IUUC-Ont-071961	Oreochromis niloticus	33.27	2.00e-80	292.00
IUUC-Oan-073565	Ornithorhynchus anatinus	34.46	5.00e-82	298.00
IUUC-Ocu-074951	Oryctolagus cuniculus	34.30	2.00e-84	306.00
IUUC-Oba-075688	Oryza barthii	96.98	0.00e+00	882.00
IUUC-Obr-076652	Oryza brachyantha	98.17	0.00e+00	742.00
IUUC-Ogl-077910	Oryza glaberrima	100.00	0.00e+00	926.00
IUUC-Ogu-078479	Oryza glumaepatula	99.64	0.00e+00	924.00
IUUC-Oin-079697	Oryza indica	99.76	0.00e+00	772.00
IUUC-Olo-080811	Oryza longistaminata	100.00	3.00e-165	573.00
IUUC-Ome-081706	Oryza meridionalis	98.17	0.00e+00	890.00
IUUC-Oni-083070	Oryza nivara	99.82	0.00e+00	924.00
IUUC-Opu-083605	Oryza punctata	99.46	0.00e+00	721.00
IUUC-Osa-085351	Oryza sativa	99.52	0.00e+00	786.00
IUUC-Ola-086743	Oryzias latipes	38.67	8.00e-81	293.00
IUUC-Olu-087695	Ostreococcus lucimarinus	34.99	5.00e-56	210.00
IUUC-Oga-089131	Otolemur garnettii	35.61	2.00e-88	319.00
IUUC-Oar-089319	Ovis aries	36.25	2.00e-85	309.00
IUUC-Ptr-090783	Pan troglodytes	36.25	3.00e-86	311.00
IUUC-Pan-092927	Papio anubis	34.95	4.00e-88	318.00
IUUC-Psi-093670	Pelodiscus sinensis	36.22	6.00e-87	314.00
IUUC-Pma-094323	Petromyzon marinus	32.74	5.00e-63	234.00
IUUC-Pno-095141	Phaeosphaeria nodorum	27.68	8.00e-44	171.00
IUUC-Ppa-095413	Physcomitrella patens	56.26	3.00e-129	454.00
IUUC-Pfo-096473	Poecilia formosa	34.70	1.00e-86	313.00
IUUC-Pab-097612	Pongo abelii	35.00	4.00e-88	318.00
IUUC-Pop-099558	Populus trichocarpa	57.98	0.00e+00	654.00
IUUC-Pca-100329	Procavia capensis	34.30	2.00e-86	312.00
IUUC-Ppe-102020	Prunus persica	60.59	0.00e+00	649.00
IUUC-Pva-102721	Pteropus vampyrus	33.03	5.00e-78	284.00
IUUC-Pgr-103657	Puccinia graminis	28.16	1.00e-34	140.00
IUUC-Pte-104340	Pyrenophora teres	27.56	5.00e-44	171.00
IUUC-Pyt-104782	Pyrenophora triticirepentis	29.06	8.00e-51	194.00
IUUC-Rno-105247	Rattus norvegicus	35.00	8.00e-88	317.00
IUUC-Sce-106247	Saccharomyces cerevisiae	24.82	8.00e-38	150.00
IUUC-Sha-107429	Sarcophilus harrisii	26.53	1.00e-32	134.00
IUUC-Sja-107656	Schizosaccharomyces japonicus	26.28	1.00e-46	180.00
IUUC-Spo-108226	Schizosaccharomyces pombe	27.82	4.00e-50	191.00
IUUC-Ssl-108531	Sclerotinia sclerotiorum	30.08	7.00e-52	197.00
IUUC-Smo-109310	Selaginella moellendorffii	49.65	5.00e-139	487.00
IUUC-Sit-109716	Setaria italica	89.41	0.00e+00	843.00
IUUC-Sly-111077	Solanum lycopersicum	50.27	3.00e-142	498.00
IUUC-Stu-112203	Solanum tuberosum	53.56	5.00e-130	457.00
IUUC-Sar-113174	Sorex araneus	34.25	9.00e-76	276.00
IUUC-Sbi-114205	Sorghum bicolor	87.81	0.00e+00	851.00
IUUC-Sre-115195	Sporisorium reilianum	30.23	1.00e-28	121.00
IUUC-Ssc-115315	Sus scrofa	33.94	2.00e-86	312.00
IUUC-Tgu-116938	Taeniopygia guttata	36.25	5.00e-86	310.00
IUUC-Tru-117622	Takifugu rubripes	34.23	2.00e-84	305.00
IUUC-Tsy-119413	Tarsius syrichta	33.69	9.00e-82	297.00
IUUC-Tni-120661	Tetraodon nigroviridis	33.99	2.00e-84	306.00
IUUC-Tca-121716	Theobroma cacao	58.31	0.00e+00	626.00
IUUC-Tre-122139	Trichoderma reesei	28.54	2.00e-48	186.00
IUUC-Tvi-122599	Trichoderma virens	28.51	4.00e-49	188.00
IUUC-Tae-125608	Triticum aestivum	85.87	0.00e+00	899.00
IUUC-Tme-127115	Tuber melanosporum	32.26	1.00e-67	249.00
IUUC-Tbe-127423	Tupaia belangeri	29.00	8.00e-26	111.00
IUUC-Ttr-129006	Tursiops truncatus	34.19	6.00e-83	301.00
IUUC-Uma-129455	Ustilago maydis	30.74	2.00e-30	127.00
IUUC-Vda-129829	Verticillium dahliae	27.85	3.00e-34	137.00
IUUC-Vvi-131477	Vitis vinifera	51.71	7.00e-142	496.00
IUUC-Xtr-132444	Xenopus tropicalis	34.77	4.00e-88	318.00
IUUC-Xma-133190	Xiphophorus maculatus	37.23	2.00e-83	302.00
IUUC-Yli-134357	Yarrowia lipolytica	28.94	7.00e-46	177.00
IUUC-Zma-134945	Zea mays	86.35	0.00e+00	813.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence