iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2792__AT2G45920.1	fgenesh2_kg.4__2792__AT2G45920.1	fgenesh2_kg.4__2792__AT2G45920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-28	97.5	328	400

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            p++f+CpIsle+M+dP  +++G ty++++I  wl++g++t+P+t+++l +++lvPnl+lr+ iq+w++++ss
   Q: 328  APQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQRGHETSPMTNKKLLHTKLVPNLALRSAIQEWLHASSS 400
           79******************************************************************99876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMGKPGSLQL LMDEKIYVAV GSDLGNKSTL VWAIQNTGGK EFCIVHVHQP LYRKDKEKAQ 60
KILDKYLQTC RQMQVCAETI HIEMDSVEEG IIQLISERHV KKLVMGAASD RHYSMRMADL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTGACTTC GTATGCATGT TATAACATAA GAAAATGTTC TTGTTTGTTG ATTGCTCCCT 60
CTGTTAAATC AATCATCTCT TTTCTTGTAT TGCAAAAAAT TTATGTTTGT TCTTGTTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014729--Rossmann-like_a/b/a_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_483732

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007172	Arabidopsis thaliana	91.81	0.00e+00	715.00
IUUC-Mla-059035	Melampsora laricipopulina	25.76	3.90e-01	30.40
IUUC-Oba-075439	Oryza barthii	29.57	3.00e-38	152.00
IUUC-Ogl-077672	Oryza glaberrima	29.57	3.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence