iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135276

Ensembl Protein ID

Zm00001d017616_T001

UniProt Accession

Q3V810; Q3V810_MAIZE

Genbank Protein ID

AAM76742.1; AIB05885.1; AQK73567.1

Protein Name

Anthocyanin biosynthetic gene regulator PAC1; WD40 transcription factor

Genbank Nucleotide ID

AY115485; KJ728394; CM000781

Gene Name

pac1; WD40.1; ZEAMMB73_Zm00001d017616

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d017616	Zm00001d017616_T001	Zm00001d017616_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-17	63.3	183	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H   v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 183  HDKAVHDIAWGEaGVFASVSADGSVRVFDLRD 214
           8889******55799**************987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDPPKPPSSV ASSSGPETPN PHAFTCELPH SIYALAFSPV APVLASGSFL EDLHNRVSLL 60
SFDPVRPSAA SFRALPALSF DHPYPPTKLQ FNPRAAAPSL LASSADTLRI WHTPLDDLSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCCAC CCAAGCCGCC GTCCTCGGTC GCCTCGTCGT CGGGGCCGGA GACGCCGAAC 60
CCGCACGCCT TCACCTGCGA GCTCCCGCAC TCGATCTACG CGCTCGCCTT CTCCCCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0045165--P:cell fate commitment
GO:0032880--P:regulation of protein localization
GO:0009733--P:response to auxin
GO:0009723--P:response to ethylene
GO:0010026--P:trichome differentiation

KEGG

zma:103627556

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	88.18	6.00e-48	181.00
IUUC-Aly-006211	Arabidopsis lyrata	63.13	2.00e-122	431.00
IUUC-Ath-006884	Arabidopsis thaliana	63.13	4.00e-123	433.00
IUUC-Bdi-014944	Brachypodium distachyon	88.14	5.00e-179	619.00
IUUC-Bol-015620	Brassica oleracea	63.58	2.00e-118	418.00
IUUC-Bra-017045	Brassica rapa	63.28	5.00e-118	416.00
IUUC-Cne-026871	Cryptococcus neoformans	37.79	1.00e-42	166.00
IUUC-Cme-027345	Cyanidioschyzon merolae	38.19	6.00e-46	177.00
IUUC-Gma-043012	Glycine max	63.80	3.00e-119	421.00
IUUC-Hvu-047639	Hordeum vulgare	89.79	6.00e-170	589.00
IUUC-Lpe-051336	Leersia perrieri	87.80	6.00e-172	596.00
IUUC-Mtr-058793	Medicago truncatula	61.11	9.00e-122	429.00
IUUC-Mla-058866	Melampsora laricipopulina	33.66	4.00e-48	184.00
IUUC-Mvi-060379	Microbotryum violaceum	34.53	9.00e-40	157.00
IUUC-Mac-065344	Musa acuminata	61.14	1.00e-108	385.00
IUUC-Oba-075455	Oryza barthii	82.63	6.00e-155	539.00
IUUC-Obr-076064	Oryza brachyantha	80.95	1.00e-158	552.00
IUUC-Ogl-077224	Oryza glaberrima	82.63	6.00e-155	539.00
IUUC-Ogu-078639	Oryza glumaepatula	82.34	3.00e-154	537.00
IUUC-Oin-080194	Oryza indica	82.34	9.00e-155	538.00
IUUC-Olo-080234	Oryza longistaminata	82.34	1.00e-154	538.00
IUUC-Oni-082021	Oryza nivara	82.34	9.00e-155	538.00
IUUC-Opu-083903	Oryza punctata	84.89	4.00e-157	546.00
IUUC-Oru-084738	Oryza rufipogon	82.63	6.00e-155	539.00
IUUC-Osa-085445	Oryza sativa	82.63	6.00e-155	539.00
IUUC-Pop-099260	Populus trichocarpa	62.94	3.00e-120	424.00
IUUC-Ppe-101664	Prunus persica	63.85	5.00e-124	436.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	36.57	1.00e-42	166.00
IUUC-Spo-108014	Schizosaccharomyces pombe	33.78	4.00e-45	175.00
IUUC-Sly-111838	Solanum lycopersicum	62.68	6.00e-124	436.00
IUUC-Stu-112145	Solanum tuberosum	63.56	3.00e-125	441.00
IUUC-Sbi-113984	Sorghum bicolor	96.44	2.00e-165	574.00
IUUC-Tca-121493	Theobroma cacao	63.77	2.00e-120	424.00
IUUC-Tae-125936	Triticum aestivum	89.19	1.00e-168	585.00
IUUC-Uma-129362	Ustilago maydis	34.57	4.00e-45	175.00
IUUC-Vvi-131483	Vitis vinifera	64.09	5.00e-124	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence