iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114758

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G153700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g013350	Sb01g013350.1	Sb01g013350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.00e-08	33.9	90	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlp.CgHvfhadC.lqkwpglknssskefrCPlCr 46
           CaiCl+++ +g   ++vlp CgH+fhadC +  w       + + +CP+Cr
   Q: 90   CAICLSEYAKGdelVRVLPaCGHFFHADCrIDWW------LRHRGTCPICR 134
           ********66666699*************65778......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTPDTAFVLE MAAVVCLVVL IVAIVAAAAG ACEPVAAAVH DVEQALGPAT LMTYDQARTK 60
AASTGTGGNG EKGSASAPAP SSAEEEAPWC AICLSEYAKG DELVRVLPAC GHFFHADCRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCCCCG ACACGGCCTT CGTGCTGGAG ATGGCCGCCG TGGTCTGCCT GGTGGTGCTC 60
ATCGTCGCCA TCGTCGCCGC CGCGGCGGGC GCCTGTGAGC CTGTTGCCGC CGCGGTGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g013350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014431	Brachypodium distachyon	68.89	3.00e-14	70.10
IUUC-Mla-059167	Melampsora laricipopulina	44.00	2.00e-06	47.00
IUUC-Ome-081200	Oryza meridionalis	48.31	1.00e-08	52.40
IUUC-Opu-084084	Oryza punctata	45.30	6.00e-18	82.40
IUUC-Tae-123979	Triticum aestivum	69.05	3.00e-12	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence