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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105775
Ensembl Protein ID ENSRNOP00000016995.5
UniProt Accession B1H248; B1H248_RAT
Genbank Protein ID AAI60860.1
Protein Name Vacuolar protein-sorting-associated protein 36; Vps36 protein
Genbank Nucleotide ID AABR07026384
Gene Name Vps36
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000012654.7 ENSRNOT00000016995.7 ENSRNOP00000016995.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
miRNAMap
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/PH/GLUE 1.00e-74 249.5 1 138
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/PH/GLUE
   S: 1    mdrfvytealLeinetlvirqrsvkiydgdekikfdaGellLtthRLiWirdqkneevtlaipLsavvfieeeaaaigksakivvhlhp 89
           mdrfv+t++lLeinetlvi+qr+v++ydg+ekikfdaG+llL+thRLiW rdqkn+e+++aipLs++vfiee+aa+igksakivvhlhp
   Q: 1    MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIW-RDQKNNECCMAIPLSQIVFIEEQAAGIGKSAKIVVHLHP 88
           9************************************************.*************************************** PP
   S: 90   arsdkePGpldsskasyiklsfkekgdiefyskLseeltaRaWeelevse 139
           a+++kePGp++ssk+syiklsfke+g+iefy++Lsee+t+R+We+++vs+
   Q: 89   APPNKEPGPFQSSKNSYIKLSFKEHGQIEFYRRLSEEMTQRRWETVPVSQ 138
           ************************************************97 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MDRFVWTSGL LEINETLVIQ QRGVRVYDGE EKIKFDAGTL LLSTHRLIWR DQKNNECCMA 60
IPLSQIVFIE EQAAGIGKSA KIVVHLHPAP PNKEPGPFQS SKNSYIKLSF KEHGQIEFYR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105775|UBD,GLUE|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGCGAGCGG CAGAGGCCGG CCGGGTGGCG GCCATGGACC GCTTCGTGTG GACCAGCGGC 60
CTCCTGGAGA TCAACGAGAC CCTGGTGATC CAGCAGCGAG GAGTGCGCGT CTACGACGGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105775|UBD,GLUE|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR007286--EAP30
IPR021648--GLUE_dom
IPR011993--PH_dom-like
IPR011991--WHTH_DNA-bd_dom
PROSITE

PS51495--GLUE
Pfam

PF04157--EAP30
PF11605--Vps36_ESCRT-II
Gene Ontology

GO:0005829--C:cytosol
GO:0070062--C:extracellular exosome
GO:0031902--C:late endosome membrane
GO:0005764--C:lysosome
GO:0032266--F:phosphatidylinositol-3-phosphate binding
KEGG rno:290851
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000963 Aegilops tauschii 42.63 5.00e-35 140.00
IUUC-Aml-002313 Ailuropoda melanoleuca 95.85 0.00e+00 743.00
IUUC-Atr-003096 Amborella trichopoda 36.73 2.00e-15 76.30
IUUC-Apl-003218 Anas platyrhynchos 87.40 0.00e+00 677.00
IUUC-Aca-004580 Anolis carolinensis 88.08 0.00e+00 689.00
IUUC-Aly-006398 Arabidopsis lyrata 37.32 4.00e-58 218.00
IUUC-Ath-006907 Arabidopsis thaliana 38.24 3.00e-58 219.00
IUUC-Ago-007840 Ashbya gossypii 21.60 4.00e-03 36.20
IUUC-Acl-008117 Aspergillus clavatus 32.39 1.00e-36 147.00
IUUC-Afl-008595 Aspergillus flavus 33.54 7.00e-36 145.00
IUUC-Afu-008918 Aspergillus fumigatus 31.40 6.00e-35 142.00
IUUC-Ani-009206 Aspergillus nidulans 33.04 6.00e-36 145.00
IUUC-Ang-009784 Aspergillus niger 32.41 1.00e-33 137.00
IUUC-Aor-010126 Aspergillus oryzae 33.54 7.00e-36 145.00
IUUC-Ate-010303 Aspergillus terreus 32.72 1.00e-34 141.00
IUUC-Ame-011190 Astyanax mexicanus 83.77 0.00e+00 658.00
IUUC-Bgr-011979 Blumeria graminis 30.79 3.00e-32 133.00
IUUC-Bta-012661 Bos taurus 95.34 0.00e+00 738.00
IUUC-Bci-013982 Botrytis cinerea 32.60 1.00e-31 131.00
IUUC-Bdi-014753 Brachypodium distachyon 40.35 7.00e-51 194.00
IUUC-Bol-015465 Brassica oleracea 42.86 3.00e-49 189.00
IUUC-Bra-016794 Brassica rapa 43.72 2.00e-50 193.00
IUUC-Cel-018514 Caenorhabditis elegans 40.83 3.00e-81 295.00
IUUC-Cja-019285 Callithrix jacchus 94.92 0.00e+00 665.00
IUUC-Cfa-020746 Canis familiaris 95.34 0.00e+00 737.00
IUUC-Cpo-022005 Cavia porcellus 95.76 0.00e+00 680.00
IUUC-Cre-022686 Chlamydomonas reinhardtii 35.25 2.00e-32 134.00
IUUC-Csa-023520 Chlorocebus sabaeus 95.85 0.00e+00 743.00
IUUC-Cho-024957 Choloepus hoffmanni 91.19 0.00e+00 703.00
IUUC-Cin-025575 Ciona intestinalis 45.24 8.00e-08 48.10
IUUC-Csv-025942 Ciona savignyi 51.81 2.00e-108 385.00
IUUC-Cgl-026558 Colletotrichum gloeosporioides 33.04 6.00e-32 132.00
IUUC-Cne-026915 Cryptococcus neoformans 27.97 1.00e-23 104.00
IUUC-Cme-027099 Cyanidioschyzon merolae 24.68 7.00e-12 65.10
IUUC-Dre-027753 Danio rerio 83.51 0.00e+00 656.00
IUUC-Dno-029922 Dasypus novemcinctus 93.78 0.00e+00 728.00
IUUC-Dor-030643 Dipodomys ordii 88.60 0.00e+00 674.00
IUUC-Dse-031368 Dothistroma septosporum 32.11 2.00e-30 127.00
IUUC-Dme-031977 Drosophila melanogaster 44.53 1.00e-94 339.00
IUUC-Ete-033135 Echinops telfairi 73.09 9.00e-138 483.00
IUUC-Eca-033937 Equus caballus 94.63 0.00e+00 670.00
IUUC-Eeu-034483 Erinaceus europaeus 91.45 0.00e+00 733.00
IUUC-Fca-035496 Felis catus 95.20 0.00e+00 673.00
IUUC-Fal-036743 Ficedula albicollis 88.60 0.00e+00 694.00
IUUC-Fox-037685 Fusarium oxysporum 36.12 9.00e-28 118.00
IUUC-Fso-038421 Fusarium solani 33.74 2.00e-28 120.00
IUUC-Gmo-039456 Gadus morhua 78.33 3.00e-174 604.00
IUUC-Ggr-039763 Gaeumannomyces graminis 33.33 6.00e-37 149.00
IUUC-Gga-040556 Gallus gallus 88.08 0.00e+00 685.00
IUUC-Gac-041481 Gasterosteus aculeatus 79.43 4.00e-159 553.00
IUUC-Gma-044185 Glycine max 44.26 5.00e-53 201.00
IUUC-Ggo-044849 Gorilla gorilla 96.11 0.00e+00 743.00
IUUC-Hsa-046228 Homo sapiens 96.11 0.00e+00 743.00
IUUC-Hvu-047858 Hordeum vulgare 38.68 3.00e-13 69.30
IUUC-Itr-048068 Ictidomys tridecemlineatus 92.53 0.00e+00 715.00
IUUC-Kpa-049240 Komagataella pastoris 24.77 9.00e-07 48.50
IUUC-Lch-050293 Latimeria chalumnae 86.21 1.00e-124 438.00
IUUC-Lpe-051363 Leersia perrieri 45.49 4.00e-52 198.00
IUUC-Loc-052866 Lepisosteus oculatus 83.90 0.00e+00 639.00
IUUC-Lma-053139 Leptosphaeria maculans 31.85 2.00e-32 134.00
IUUC-Laf-053881 Loxodonta africana 88.86 0.00e+00 684.00
IUUC-Mcc-055158 Macaca mulatta 95.60 0.00e+00 742.00
IUUC-Meu-056126 Macropus eugenii 72.03 2.00e-132 464.00
IUUC-Mor-057092 Magnaporthe oryzae 31.75 3.00e-33 137.00
IUUC-Mpo-057629 Magnaporthe poae 32.78 5.00e-29 121.00
IUUC-Mtr-058039 Medicago truncatula 44.44 3.00e-53 202.00
IUUC-Mla-058913 Melampsora laricipopulina 29.45 4.00e-24 106.00
IUUC-Mga-059956 Meleagris gallopavo 88.08 0.00e+00 689.00
IUUC-Mvi-060570 Microbotryum violaceum 24.50 3.00e-18 87.40
IUUC-Mmr-061769 Microcebus murinus 95.76 0.00e+00 676.00
IUUC-Mdo-062751 Monodelphis domestica 89.09 0.00e+00 700.00
IUUC-Mmu-063115 Mus musculus 98.45 0.00e+00 759.00
IUUC-Mac-064979 Musa acuminata 35.85 4.00e-53 202.00
IUUC-Mpu-066904 Mustela putorius furo 96.20 1.00e-136 478.00
IUUC-Mlu-067474 Myotis lucifugus 94.56 0.00e+00 733.00
IUUC-Nfi-068588 Neosartorya fischeri 31.68 2.00e-33 137.00
IUUC-Ncr-068855 Neurospora crassa 30.50 1.00e-28 121.00
IUUC-Nle-069660 Nomascus leucogenys 95.34 0.00e+00 738.00
IUUC-Opr-070695 Ochotona princeps 94.56 0.00e+00 733.00
IUUC-Ont-071837 Oreochromis niloticus 82.20 6.00e-173 600.00
IUUC-Oan-072903 Ornithorhynchus anatinus 91.29 0.00e+00 655.00
IUUC-Ocu-074833 Oryctolagus cuniculus 95.60 0.00e+00 742.00
IUUC-Oba-075899 Oryza barthii 45.83 3.00e-52 198.00
IUUC-Obr-076125 Oryza brachyantha 35.97 3.00e-56 212.00
IUUC-Ogl-077538 Oryza glaberrima 50.71 1.00e-32 134.00
IUUC-Ogu-078272 Oryza glumaepatula 45.49 3.00e-52 199.00
IUUC-Oin-079158 Oryza indica 45.19 8.00e-52 197.00
IUUC-Olo-080496 Oryza longistaminata 44.58 2.00e-48 185.00
IUUC-Ome-081440 Oryza meridionalis 45.19 6.00e-50 190.00
IUUC-Oni-083069 Oryza nivara 45.19 8.00e-52 197.00
IUUC-Opu-083838 Oryza punctata 45.96 1.00e-50 192.00
IUUC-Oru-084377 Oryza rufipogon 45.49 3.00e-52 199.00
IUUC-Osa-085976 Oryza sativa 45.49 3.00e-52 199.00
IUUC-Ola-086431 Oryzias latipes 84.03 2.00e-176 611.00
IUUC-Olu-087789 Ostreococcus lucimarinus 38.43 2.00e-38 151.00
IUUC-Oga-089152 Otolemur garnettii 95.60 0.00e+00 740.00
IUUC-Oar-089198 Ovis aries 95.20 0.00e+00 673.00
IUUC-Ptr-091123 Pan troglodytes 96.11 0.00e+00 743.00
IUUC-Pan-092866 Papio anubis 92.25 0.00e+00 712.00
IUUC-Psi-093384 Pelodiscus sinensis 91.97 0.00e+00 714.00
IUUC-Pno-094773 Phaeosphaeria nodorum 30.40 5.00e-27 115.00
IUUC-Ppa-095753 Physcomitrella patens 35.86 2.00e-55 209.00
IUUC-Pfo-096028 Poecilia formosa 82.20 2.00e-174 605.00
IUUC-Pop-098915 Populus trichocarpa 45.27 1.00e-52 200.00
IUUC-Pca-100422 Procavia capensis 92.09 0.00e+00 649.00
IUUC-Ppe-101564 Prunus persica 44.90 6.00e-54 204.00
IUUC-Pva-103019 Pteropus vampyrus 91.45 0.00e+00 696.00
IUUC-Pgr-103670 Puccinia graminis 27.94 7.00e-22 99.00
IUUC-Ptt-103958 Puccinia triticina 27.20 2.00e-20 93.20
IUUC-Pte-104343 Pyrenophora teres 32.42 6.00e-38 152.00
IUUC-Pyt-104554 Pyrenophora triticirepentis 32.14 4.00e-40 159.00
IUUC-Sce-106148 Saccharomyces cerevisiae 21.66 4.00e-03 36.60
IUUC-Sha-106468 Sarcophilus harrisii 90.96 0.00e+00 647.00
IUUC-Sja-107850 Schizosaccharomyces japonicus 24.14 1.00e-17 84.30
IUUC-Spo-108225 Schizosaccharomyces pombe 23.79 2.00e-17 83.60
IUUC-Ssl-108412 Sclerotinia sclerotiorum 32.84 1.00e-30 127.00
IUUC-Smo-109001 Selaginella moellendorffii 36.68 4.00e-57 215.00
IUUC-Sit-110126 Setaria italica 35.48 5.00e-50 191.00
IUUC-Sly-110884 Solanum lycopersicum 36.10 2.00e-53 202.00
IUUC-Stu-112573 Solanum tuberosum 35.88 2.00e-53 203.00
IUUC-Sar-113114 Sorex araneus 91.79 8.00e-70 256.00
IUUC-Sbi-114331 Sorghum bicolor 30.49 9.00e-39 154.00
IUUC-Sre-115135 Sporisorium reilianum 23.35 2.00e-10 61.20
IUUC-Ssc-116158 Sus scrofa 95.85 0.00e+00 744.00
IUUC-Tgu-116962 Taeniopygia guttata 88.34 0.00e+00 663.00
IUUC-Tru-117567 Takifugu rubripes 81.94 3.00e-174 604.00
IUUC-Tsy-119357 Tarsius syrichta 79.58 6.00e-162 563.00
IUUC-Tni-120047 Tetraodon nigroviridis 81.95 6.00e-155 540.00
IUUC-Tca-121097 Theobroma cacao 44.44 4.00e-54 205.00
IUUC-Tre-122075 Trichoderma reesei 32.07 1.00e-33 137.00
IUUC-Tvi-122623 Trichoderma virens 33.43 2.00e-40 160.00
IUUC-Tae-123728 Triticum aestivum 44.03 3.00e-51 195.00
IUUC-Tur-125988 Triticum urartu 42.86 6.00e-41 161.00
IUUC-Tme-126936 Tuber melanosporum 31.11 5.00e-34 139.00
IUUC-Tbe-127481 Tupaia belangeri 67.23 3.00e-128 451.00
IUUC-Ttr-128160 Tursiops truncatus 94.82 0.00e+00 727.00
IUUC-Uma-129428 Ustilago maydis 25.25 4.00e-16 80.10
IUUC-Vda-129877 Verticillium dahliae 31.86 2.00e-30 127.00
IUUC-Vpa-130358 Vicugna pacos 95.76 0.00e+00 673.00
IUUC-Vvi-131406 Vitis vinifera 37.40 4.00e-57 215.00
IUUC-Xtr-132548 Xenopus tropicalis 84.50 0.00e+00 647.00
IUUC-Xma-133352 Xiphophorus maculatus 82.46 1.00e-174 605.00
IUUC-Yli-134466 Yarrowia lipolytica 30.00 4.00e-21 95.90
IUUC-Zma-135081 Zea mays 40.99 8.00e-52 197.00
Created Date 25-Jun-2017

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