iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-042924

Ensembl Protein ID

GLYMA05G34060.1

UniProt Accession

I1K5E5; I1K5E5_SOYBN

Genbank Protein ID

KRH60498.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000838

Gene Name

LOC100805073; GLYMA_05G243900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA05G34060	GLYMA05G34060.1	GLYMA05G34060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-31	107.3	232	266
UBD/Beta-Prp	3.90e-60	205.2	55	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gHt+s++++++ +d +l+++ s D++ kvWD++++
   Q: 232  GHTGSIYAVSWsPDgKLVLTVSADKSAKVWDITED 266
           8***********999****************9876 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD...rtikvwdlstgkcvhtlkgheds 96
           g+h  + t+  fsp+++++a++ ++g++++w +++  +l++     +a + ++++spdg  +v ++e     +++ +  ++g+ v  + gh+++
   Q: 55   GDHAYPATVARFSPNGEWVASADASGSVRIWGTRNDFVLKKEfRVLSARIDDLQWSPDGLRIVACGEGkgkSFVRAFMWDSGTNVGEFDGHSRR 148
           7889999****************************99877665*************************9999********************** PP
   S: 97   vlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvysls 187
           vls+++ p++  ++v+ ++d  ++ ++ +         + h+ +vncv+++pdg+ ++s s D++  ++d ++++ + +l  +gght+s+y +s
   Q: 149  VLSCAYKPTRpFRVVTCGEDFLLNFYEGPPFRFKL-SHRDHSNFVNCVRYSPDGSKFISVSSDKKGIIFDGNSAEKIGELssEGGHTGSIYAVS 241
           ********997899**************9999999.9*******************************************99999********* PP
   S: 188  fdsngkelvsgsldgtvklwdlq...tgecvrtlngh 221
           ++++gk ++++s d++ k+wd+    +g++ +tl++ 
   Q: 242  WSPDGKLVLTVSADKSAKVWDITednNGKVKKTLTCP 278
           **********************999999998888875 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSHELLETYA CMPTTERGRG ILISGDAKSN SIVYTNGRSV VMMNLQNPLN VSVYGDHAYP 60
ATVARFSPNG EWVASADASG SVRIWGTRND FVLKKEFRVL SARIDDLQWS PDGLRIVACG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAGTGTGG TGGTATGTTG TTGCTTGTAT TTGTGTTGTT CAATAGAGCT TGGTCGGTTC 60
CGGCATCGTG CTCTGCTCTG CACACCTTTC TCTTTCTCTC TGTCTGAGGC TCTGAGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042643--C:actomyosin, actin portion
GO:0030864--C:cortical actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030042--P:actin filament depolymerization
GO:0030836--P:positive regulation of actin filament depolymerization

KEGG

gmx:100805073

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dme-031597	Drosophila melanogaster	36.60	1.00e-115	410.00
IUUC-Lpe-051306	Leersia perrieri	70.56	0.00e+00	931.00
IUUC-Loc-052096	Lepisosteus oculatus	35.29	4.00e-98	352.00
IUUC-Lma-053313	Leptosphaeria maculans	35.18	7.00e-90	327.00
IUUC-Mla-059103	Melampsora laricipopulina	30.50	4.00e-67	249.00
IUUC-Oan-073594	Ornithorhynchus anatinus	31.02	2.00e-29	123.00
IUUC-Oba-075010	Oryza barthii	69.24	0.00e+00	920.00
IUUC-Ogl-077019	Oryza glaberrima	69.24	0.00e+00	920.00
IUUC-Ogu-078496	Oryza glumaepatula	69.24	0.00e+00	920.00
IUUC-Oin-080116	Oryza indica	69.08	0.00e+00	919.00
IUUC-Olo-080290	Oryza longistaminata	69.41	0.00e+00	924.00
IUUC-Ome-081969	Oryza meridionalis	69.08	0.00e+00	919.00
IUUC-Oni-082075	Oryza nivara	69.24	0.00e+00	922.00
IUUC-Opu-083959	Oryza punctata	70.41	0.00e+00	926.00
IUUC-Oru-084711	Oryza rufipogon	69.24	0.00e+00	920.00
IUUC-Osa-085958	Oryza sativa	69.08	0.00e+00	919.00
IUUC-Ppa-095876	Physcomitrella patens	57.59	0.00e+00	747.00
IUUC-Pgr-103593	Puccinia graminis	32.09	2.00e-71	263.00
IUUC-Pte-104365	Pyrenophora teres	34.20	5.00e-84	305.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	33.66	1.00e-86	313.00
IUUC-Sit-109962	Setaria italica	70.41	0.00e+00	930.00
IUUC-Sbi-114857	Sorghum bicolor	69.75	0.00e+00	917.00
IUUC-Tae-123530	Triticum aestivum	67.82	0.00e+00	901.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence