iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058473

Ensembl Protein ID

KEH27281

UniProt Accession

A0A072UCU5; A0A072UCU5_MEDTR

Genbank Protein ID

KEH27281.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g093060

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g093060	KEH27281	KEH27281

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-31	106.7	555	586
UBD/Beta-Prp	1.00e-56	193.8	310	586

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dg++++WD+
   Q: 555  GHTDRITDLCFsEDgKWLLSSSMDGSLRIWDV 586
           8**********955699**************6 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheae...................vtavkfspdgk.ilvtgseD.rtikvwdls.. 82
           ++ h+++  c+kf  ++++++++++d+  ++++v + +  r+l + h ++                     + ++ +++    vt+++D + ++vw l+  
   Q: 310  RSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELsQRHVSKrakklrvkeeeiklkpviaFDCAEIRERDWcNVVTCHTDtAQAYVWRLQnf 410
           5668888899*****************************999955666669999************98888888888865789******999****99944 PP
   S: 83   ..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
                ++    ++   v ++++s+ g++ + G++   i+ ++l++g    +           hd+ v +v+ + ++ l++s ++ + +++Wd k  +l  +
   Q: 411  vlGEHILTPCPENPTPVKTCAISACGNFAILGTAGGWIEKFNLQSGIHRGAyidmsesRSCAHDSEVVGVACDATNTLMISVGYQGDIKVWDFKERSLKSK 511
           444444444559*****************************999998777788888888889*************************************** PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
           l      sv ++ +++    l+++++d t++l+d+ + + vr+++ghtd ++++ fs+++++l+s s+Dgs+riWd+
   Q: 512  LD--VGCSVVKIVYHRYNGLLATVADDLTIRLFDVVALRLVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDV 586
           *5..5899*****999999********************************************************96 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGIFEPYRAI GCISTGVPFS VQRLNTETFV TVSVGKAFQI FNYAKLTLVL VSPQLPKKIT 60
SLASYRDFTF ASYGNHIAVF KRAHQVATWS SHTAKVKSLL LFGEHILSLD AQGNIFLWAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTTTCTTC ATCTTCTCGA ACACCGGCGG CGACATTCTA AGGGCAAAAT GGGTATTTTC 60
GAACCATACA GAGCCATCGG ATGCATCTCC ACCGGTGTCC CTTTCTCCGT TCAACGACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

mtr:MTR_6g093060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	72.06	0.00e+00	1283.00
IUUC-Aml-002289	Ailuropoda melanoleuca	36.05	2.00e-148	519.00
IUUC-Atr-002859	Amborella trichopoda	69.10	0.00e+00	1142.00
IUUC-Apl-003505	Anas platyrhynchos	37.98	6.00e-143	501.00
IUUC-Aca-004339	Anolis carolinensis	35.57	2.00e-148	518.00
IUUC-Aly-005913	Arabidopsis lyrata	72.98	0.00e+00	1313.00
IUUC-Ath-006767	Arabidopsis thaliana	72.00	0.00e+00	1306.00
IUUC-Ago-007763	Ashbya gossypii	31.25	1.00e-114	407.00
IUUC-Acl-008275	Aspergillus clavatus	31.05	1.00e-81	297.00
IUUC-Afl-008457	Aspergillus flavus	31.99	3.00e-81	295.00
IUUC-Afu-008914	Aspergillus fumigatus	29.30	1.00e-88	320.00
IUUC-Ani-009225	Aspergillus nidulans	31.25	5.00e-94	338.00
IUUC-Aor-010046	Aspergillus oryzae	30.38	6.00e-106	378.00
IUUC-Ate-010337	Aspergillus terreus	28.66	2.00e-101	363.00
IUUC-Ame-010963	Astyanax mexicanus	35.68	2.00e-142	499.00
IUUC-Bgr-011973	Blumeria graminis	29.15	2.00e-106	379.00
IUUC-Bta-012462	Bos taurus	36.22	1.00e-148	520.00
IUUC-Bci-013940	Botrytis cinerea	30.67	3.00e-122	432.00
IUUC-Bdi-014725	Brachypodium distachyon	70.58	0.00e+00	1264.00
IUUC-Bol-016534	Brassica oleracea	73.03	0.00e+00	1321.00
IUUC-Bra-016781	Brassica rapa	70.48	0.00e+00	1281.00
IUUC-Cel-018581	Caenorhabditis elegans	27.76	3.00e-85	309.00
IUUC-Cja-019675	Callithrix jacchus	35.61	6.00e-155	541.00
IUUC-Cfa-020118	Canis familiaris	36.34	5.00e-148	518.00
IUUC-Cpo-021798	Cavia porcellus	35.32	2.00e-148	518.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	32.71	5.00e-45	174.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.55	6.00e-144	504.00
IUUC-Cho-024518	Choloepus hoffmanni	30.13	7.00e-101	361.00
IUUC-Cin-025339	Ciona intestinalis	32.93	1.00e-141	496.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.95	9.00e-105	374.00
IUUC-Cne-026859	Cryptococcus neoformans	34.05	1.00e-134	473.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.64	1.00e-85	310.00
IUUC-Dre-027733	Danio rerio	35.51	1.00e-141	496.00
IUUC-Dno-029439	Dasypus novemcinctus	36.59	1.00e-145	510.00
IUUC-Dor-030329	Dipodomys ordii	33.12	2.00e-60	226.00
IUUC-Dse-031511	Dothistroma septosporum	28.41	9.00e-92	331.00
IUUC-Dme-031694	Drosophila melanogaster	33.01	7.00e-132	464.00
IUUC-Ete-032930	Echinops telfairi	35.07	3.00e-126	445.00
IUUC-Eca-033302	Equus caballus	35.98	2.00e-145	509.00
IUUC-Eeu-034516	Erinaceus europaeus	34.69	1.00e-154	540.00
IUUC-Fca-036064	Felis catus	35.73	3.00e-147	515.00
IUUC-Fal-037024	Ficedula albicollis	36.30	3.00e-152	531.00
IUUC-Fox-037787	Fusarium oxysporum	29.57	3.00e-97	349.00
IUUC-Fso-038378	Fusarium solani	29.61	1.00e-99	357.00
IUUC-Gmo-039637	Gadus morhua	35.74	8.00e-80	290.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.75	5.00e-102	365.00
IUUC-Gga-040982	Gallus gallus	36.31	5.00e-161	561.00
IUUC-Gac-041565	Gasterosteus aculeatus	35.92	8.00e-135	474.00
IUUC-Gma-043414	Glycine max	86.06	0.00e+00	1533.00
IUUC-Ggo-045463	Gorilla gorilla	35.28	7.00e-145	507.00
IUUC-Hsa-045675	Homo sapiens	35.49	2.00e-147	516.00
IUUC-Hvu-047352	Hordeum vulgare	72.44	0.00e+00	1181.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	35.44	2.00e-155	542.00
IUUC-Kpa-049164	Komagataella pastoris	32.56	3.00e-117	416.00
IUUC-Lch-050476	Latimeria chalumnae	35.13	3.00e-155	541.00
IUUC-Lpe-051556	Leersia perrieri	59.14	0.00e+00	970.00
IUUC-Loc-052820	Lepisosteus oculatus	35.10	2.00e-148	519.00
IUUC-Lma-052961	Leptosphaeria maculans	28.97	3.00e-91	329.00
IUUC-Laf-054006	Loxodonta africana	34.39	2.00e-136	479.00
IUUC-Mcc-055037	Macaca mulatta	35.24	5.00e-146	511.00
IUUC-Mor-057280	Magnaporthe oryzae	28.92	1.00e-100	360.00
IUUC-Mpo-057408	Magnaporthe poae	29.11	4.00e-96	345.00
IUUC-Mla-058892	Melampsora laricipopulina	33.33	3.00e-112	399.00
IUUC-Mga-059598	Meleagris gallopavo	32.90	1.00e-115	410.00
IUUC-Mvi-060334	Microbotryum violaceum	33.77	6.00e-117	414.00
IUUC-Mmr-061239	Microcebus murinus	35.37	1.00e-143	503.00
IUUC-Mdo-062471	Monodelphis domestica	35.26	3.00e-141	495.00
IUUC-Mmu-063872	Mus musculus	34.86	1.00e-150	526.00
IUUC-Mac-064631	Musa acuminata	72.13	0.00e+00	1178.00
IUUC-Mpu-066039	Mustela putorius furo	36.46	4.00e-159	554.00
IUUC-Mlu-067485	Myotis lucifugus	34.87	1.00e-144	506.00
IUUC-Nfi-068319	Neosartorya fischeri	29.19	4.00e-98	352.00
IUUC-Ncr-068725	Neurospora crassa	30.33	9.00e-105	374.00
IUUC-Nle-069050	Nomascus leucogenys	35.61	1.00e-147	516.00
IUUC-Opr-070437	Ochotona princeps	31.31	2.00e-43	169.00
IUUC-Ont-071574	Oreochromis niloticus	35.69	4.00e-143	501.00
IUUC-Oan-072826	Ornithorhynchus anatinus	36.44	1.00e-157	549.00
IUUC-Ocu-073995	Oryctolagus cuniculus	35.37	1.00e-144	506.00
IUUC-Oba-075407	Oryza barthii	64.82	0.00e+00	1105.00
IUUC-Obr-076451	Oryza brachyantha	71.46	0.00e+00	1309.00
IUUC-Ogl-077535	Oryza glaberrima	70.63	0.00e+00	1268.00
IUUC-Ogu-077995	Oryza glumaepatula	64.09	0.00e+00	1105.00
IUUC-Oin-079431	Oryza indica	71.02	0.00e+00	1274.00
IUUC-Olo-080495	Oryza longistaminata	63.76	0.00e+00	1095.00
IUUC-Oni-082336	Oryza nivara	68.40	0.00e+00	1199.00
IUUC-Opu-084028	Oryza punctata	65.38	0.00e+00	1088.00
IUUC-Oru-084500	Oryza rufipogon	64.12	0.00e+00	1100.00
IUUC-Osa-086242	Oryza sativa	71.32	0.00e+00	1276.00
IUUC-Ola-086612	Oryzias latipes	37.13	1.00e-108	387.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.52	8.00e-157	547.00
IUUC-Oga-088572	Otolemur garnettii	35.31	1.00e-146	513.00
IUUC-Oar-090363	Ovis aries	36.71	2.00e-150	526.00
IUUC-Ptr-090477	Pan troglodytes	35.37	5.00e-146	511.00
IUUC-Pan-092914	Papio anubis	35.24	7.00e-147	514.00
IUUC-Psi-093019	Pelodiscus sinensis	34.43	8.00e-141	493.00
IUUC-Pma-094303	Petromyzon marinus	35.39	3.00e-124	439.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.91	8.00e-87	314.00
IUUC-Ppa-095720	Physcomitrella patens	54.74	0.00e+00	976.00
IUUC-Pfo-097034	Poecilia formosa	36.14	7.00e-136	477.00
IUUC-Pab-097669	Pongo abelii	35.37	4.00e-147	514.00
IUUC-Pop-098835	Populus trichocarpa	76.85	0.00e+00	1384.00
IUUC-Pca-101097	Procavia capensis	37.25	6.00e-60	225.00
IUUC-Ppe-101430	Prunus persica	78.91	0.00e+00	1418.00
IUUC-Pva-103152	Pteropus vampyrus	36.10	1.00e-149	523.00
IUUC-Pgr-103517	Puccinia graminis	30.05	4.00e-128	451.00
IUUC-Ptt-103697	Puccinia triticina	30.73	2.00e-97	350.00
IUUC-Pte-104121	Pyrenophora teres	27.62	6.00e-90	325.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	27.33	7.00e-90	325.00
IUUC-Rno-105435	Rattus norvegicus	34.70	6.00e-148	517.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.71	5.00e-108	385.00
IUUC-Sha-107272	Sarcophilus harrisii	37.03	1.00e-138	486.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.93	2.00e-147	516.00
IUUC-Spo-108256	Schizosaccharomyces pombe	35.92	3.00e-152	531.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.97	7.00e-115	407.00
IUUC-Smo-108762	Selaginella moellendorffii	54.51	0.00e+00	968.00
IUUC-Sit-110051	Setaria italica	71.32	0.00e+00	1291.00
IUUC-Sly-111181	Solanum lycopersicum	74.58	0.00e+00	1332.00
IUUC-Stu-112018	Solanum tuberosum	75.47	0.00e+00	1332.00
IUUC-Sar-113348	Sorex araneus	35.74	3.00e-97	349.00
IUUC-Sbi-114282	Sorghum bicolor	71.02	0.00e+00	1308.00
IUUC-Sre-114946	Sporisorium reilianum	30.63	2.00e-84	307.00
IUUC-Ssc-115287	Sus scrofa	36.05	2.00e-148	519.00
IUUC-Tgu-117138	Taeniopygia guttata	35.78	8.00e-125	440.00
IUUC-Tru-118232	Takifugu rubripes	35.17	3.00e-134	472.00
IUUC-Tsy-119502	Tarsius syrichta	28.72	8.00e-98	351.00
IUUC-Tni-120378	Tetraodon nigroviridis	36.30	2.00e-138	486.00
IUUC-Tca-121506	Theobroma cacao	78.27	0.00e+00	1373.00
IUUC-Tre-122166	Trichoderma reesei	29.88	2.00e-108	386.00
IUUC-Tvi-122385	Trichoderma virens	29.90	4.00e-111	395.00
IUUC-Tae-122836	Triticum aestivum	71.92	0.00e+00	1341.00
IUUC-Tur-126490	Triticum urartu	62.51	0.00e+00	1051.00
IUUC-Tme-127157	Tuber melanosporum	31.61	2.00e-113	403.00
IUUC-Tbe-127981	Tupaia belangeri	36.97	1.00e-129	456.00
IUUC-Ttr-128886	Tursiops truncatus	35.37	2.00e-144	505.00
IUUC-Uma-129439	Ustilago maydis	30.44	2.00e-92	333.00
IUUC-Vda-129760	Verticillium dahliae	29.97	7.00e-111	394.00
IUUC-Vpa-130456	Vicugna pacos	35.78	7.00e-148	517.00
IUUC-Vvi-131086	Vitis vinifera	77.33	0.00e+00	1415.00
IUUC-Xtr-131829	Xenopus tropicalis	36.44	8.00e-161	560.00
IUUC-Xma-133588	Xiphophorus maculatus	36.14	8.00e-135	474.00
IUUC-Yli-134328	Yarrowia lipolytica	31.43	1.00e-105	377.00
IUUC-Zma-135808	Zea mays	70.35	0.00e+00	1304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence