iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043560

UUCD1 version

UUC-GlM-00808

Ensembl Protein ID

GLYMA12G12600.2

UniProt Accession

C6TC62; C6TC62_SOYBN

Genbank Protein ID

ACU19414.1; KRH25563.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

BT095141; CM000845

Gene Name

GLYMA_12G112000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G12600	GLYMA12G12600.2	GLYMA12G12600.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-07	32.0	36	85
E3 activity/RING/U-box	1.10e-07	33.4	33	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C iCle  +d p+v+ CgH+++  C++kw       l n+++++ +CP+C+
   Q: 36   CNICLECVQD-PVVTLCGHLYCWPCIYKWlhfqsTSLDNEEQQKPQCPVCK 85
           99********.9999****************99988889999999*****7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl...asggk..........tcPvtrqplteedlvPn 58
            f C I le  +dPvv+ +G+ y   +I kwl   +   +          +cPv+++++++++lvP 
   Q: 33   SFDCNICLECVQDPVVTLCGHLYCWPCIYKWLhfqS---TsldneeqqkpQCPVCKSEVSQSSLVPL 96
           69******************************6550...44455566789***************96 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MALDHFEESV HQKGNWKSSS EIIADSGRNA SGSFDCNICL ECVQDPVVTL CGHLYCWPCI 60
YKWLHFQSTS LDNEEQQKPQ CPVCKSEVSQ SSLVPLYGRG QTTIPSKGKP HQVGTVIPQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTCATTTA TCGCCTTTTC CCCGACGAAT TCATACCTTA ACCACAATTA ATTTAAGTTA 60
ATAATTATTA TTCTATTATA AAATCTCATT CTCCCAACTC TTCTTTCCCT CGTACTCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100807729

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002721	Amborella trichopoda	56.48	2.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence