iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088291

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03178049

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000014499.2	ENSOGAT00000014504.2	ENSOGAP00000012994.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-09	36.9	241	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 241  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 283
           ********66666******************.....899********7 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MLLSLGMLML SATQVYTILT VQLFAFLNLL PVEADILAYN FENASQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPLKDNSS GAFIVLIRRL DCNFDVKIIN SLRHSYLLQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCTCT CCTTAGGGAT GCTCATGCTG TCGGCCACAC AGGTCTACAC CATCCTGACT 60
GTTCAGCTTT TTGCATTCTT AAACCTACTG CCTGTAGAAG CAGACATTTT AGCAGTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001909	Ailuropoda melanoleuca	92.18	7.00e-169	586.00
IUUC-Apl-004022	Anas platyrhynchos	86.79	4.00e-157	547.00
IUUC-Aca-004641	Anolis carolinensis	82.62	2.00e-152	531.00
IUUC-Ani-009337	Aspergillus nidulans	46.30	5.00e-13	67.80
IUUC-Ame-010635	Astyanax mexicanus	66.86	2.00e-123	435.00
IUUC-Bta-012593	Bos taurus	91.37	1.00e-180	625.00
IUUC-Bci-013936	Botrytis cinerea	35.14	8.00e-13	68.60
IUUC-Cel-018181	Caenorhabditis elegans	31.14	5.00e-28	119.00
IUUC-Cja-019353	Callithrix jacchus	91.11	1.00e-166	578.00
IUUC-Cfa-020234	Canis familiaris	91.91	1.00e-168	585.00
IUUC-Cpo-021602	Cavia porcellus	88.95	2.00e-147	514.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	61.20
IUUC-Csa-023201	Chlorocebus sabaeus	92.18	2.00e-168	585.00
IUUC-Cho-024954	Choloepus hoffmanni	76.55	1.00e-132	466.00
IUUC-Cin-025554	Ciona intestinalis	40.50	5.00e-55	207.00
IUUC-Dre-028744	Danio rerio	73.01	7.00e-126	443.00
IUUC-Dno-029675	Dasypus novemcinctus	91.91	1.00e-168	585.00
IUUC-Dor-030791	Dipodomys ordii	73.05	2.00e-119	422.00
IUUC-Dme-031765	Drosophila melanogaster	38.52	1.00e-46	180.00
IUUC-Ete-032577	Echinops telfairi	80.19	1.00e-121	429.00
IUUC-Eca-034148	Equus caballus	91.64	6.00e-167	579.00
IUUC-Eeu-034552	Erinaceus europaeus	90.03	2.00e-161	561.00
IUUC-Fca-036021	Felis catus	92.72	3.00e-168	584.00
IUUC-Fal-037621	Ficedula albicollis	86.25	7.00e-155	540.00
IUUC-Fox-038011	Fusarium oxysporum	35.79	2.00e-13	70.50
IUUC-Gmo-039485	Gadus morhua	74.22	2.00e-123	435.00
IUUC-Gga-041166	Gallus gallus	86.79	2.00e-158	551.00
IUUC-Gac-042124	Gasterosteus aculeatus	72.59	7.00e-121	426.00
IUUC-Ggo-045344	Gorilla gorilla	91.91	5.00e-168	583.00
IUUC-Hsa-045960	Homo sapiens	91.91	5.00e-168	583.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	90.84	7.00e-168	583.00
IUUC-Lch-050635	Latimeria chalumnae	76.32	9.00e-123	433.00
IUUC-Loc-052869	Lepisosteus oculatus	74.39	2.00e-130	458.00
IUUC-Laf-054477	Loxodonta africana	90.30	1.00e-165	575.00
IUUC-Mcc-055232	Macaca mulatta	92.18	2.00e-168	585.00
IUUC-Meu-056237	Macropus eugenii	76.56	5.00e-106	377.00
IUUC-Mpo-057522	Magnaporthe poae	44.44	4.00e-13	69.70
IUUC-Mla-059171	Melampsora laricipopulina	38.57	1.00e-10	61.20
IUUC-Mga-059780	Meleagris gallopavo	87.33	2.00e-158	551.00
IUUC-Mmr-061384	Microcebus murinus	93.80	2.00e-170	591.00
IUUC-Mdo-062781	Monodelphis domestica	88.71	2.00e-164	571.00
IUUC-Mmu-063727	Mus musculus	88.68	1.00e-155	542.00
IUUC-Mpu-066497	Mustela putorius furo	92.72	6.00e-169	586.00
IUUC-Mlu-067654	Myotis lucifugus	87.00	3.00e-97	347.00
IUUC-Nle-069368	Nomascus leucogenys	91.91	5.00e-168	583.00
IUUC-Opr-070934	Ochotona princeps	67.92	1.00e-104	373.00
IUUC-Ont-071868	Oreochromis niloticus	72.19	9.00e-119	419.00
IUUC-Oan-072733	Ornithorhynchus anatinus	83.33	4.00e-96	343.00
IUUC-Ocu-074083	Oryctolagus cuniculus	91.64	1.00e-167	582.00
IUUC-Ola-086440	Oryzias latipes	70.49	5.00e-106	377.00
IUUC-Oar-089911	Ovis aries	91.11	5.00e-180	623.00
IUUC-Ptr-091166	Pan troglodytes	91.91	5.00e-168	583.00
IUUC-Pan-092154	Papio anubis	92.18	2.00e-168	585.00
IUUC-Psi-093062	Pelodiscus sinensis	86.79	3.00e-153	534.00
IUUC-Pma-094545	Petromyzon marinus	73.21	2.00e-25	106.00
IUUC-Ppa-095928	Physcomitrella patens	31.32	3.00e-27	115.00
IUUC-Pfo-097232	Poecilia formosa	73.12	1.00e-121	429.00
IUUC-Pab-097909	Pongo abelii	91.64	2.00e-168	584.00
IUUC-Pca-100724	Procavia capensis	74.59	2.00e-127	448.00
IUUC-Pva-102624	Pteropus vampyrus	86.79	3.00e-148	517.00
IUUC-Pgr-103420	Puccinia graminis	55.32	3.00e-12	67.40
IUUC-Ptt-103943	Puccinia triticina	44.44	8.00e-11	61.60
IUUC-Rno-105109	Rattus norvegicus	87.06	2.00e-147	514.00
IUUC-Sha-107563	Sarcophilus harrisii	88.44	4.00e-159	553.00
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	9.00e-13	67.80
IUUC-Sar-113226	Sorex araneus	73.89	2.00e-61	229.00
IUUC-Sre-114989	Sporisorium reilianum	43.14	1.00e-12	68.90
IUUC-Ssc-116043	Sus scrofa	92.18	2.00e-167	581.00
IUUC-Tgu-116908	Taeniopygia guttata	85.75	4.00e-155	540.00
IUUC-Tru-118219	Takifugu rubripes	72.73	1.00e-122	432.00
IUUC-Tsy-119333	Tarsius syrichta	92.72	2.00e-166	578.00
IUUC-Tni-120332	Tetraodon nigroviridis	66.80	8.00e-79	286.00
IUUC-Tae-125320	Triticum aestivum	27.74	8.00e-25	107.00
IUUC-Tme-126894	Tuber melanosporum	39.47	2.00e-12	67.80
IUUC-Tbe-127859	Tupaia belangeri	80.27	2.00e-149	521.00
IUUC-Ttr-129219	Tursiops truncatus	83.02	8.00e-142	496.00
IUUC-Vda-129899	Verticillium dahliae	43.40	1.00e-12	68.20
IUUC-Vpa-130314	Vicugna pacos	88.41	1.00e-155	542.00
IUUC-Xtr-132114	Xenopus tropicalis	73.13	2.00e-122	432.00
IUUC-Xma-133474	Xiphophorus maculatus	73.12	7.00e-122	430.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence