iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027352

Ensembl Protein ID

CMS041CT

UniProt Accession

M1VLQ8; M1VLQ8_CYAM1

Genbank Protein ID

BAM82688.1

Protein Name

Ubiquitin conjugation factor E4 B

Genbank Nucleotide ID

AP006501

Gene Name

CYME_CMS041C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMS041C	CMS041CT	CMS041CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.60e-21	72.1	1080	1151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            p+efl+pI  +lM+dPv+lp s+  +drs+I ++l s+ + +P++rqpl+ ed++P  +l++ i +w++e++
   Q: 1080 APDEFLDPILATLMQDPVMLPsSRKIVDRSTIVRHLLSDPH-DPFNRQPLRIEDVIPQPALKEQITSWLQERQ 1151
           79*******************9*******************.***************************9875 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MNLRRAHRER MARGIDPVDA GVRCGCPARE APATRSVLKR QHKRPLTLSC IMFSGRRERD 60
PAEPRDQLQG DSYYTEAGST EQNPLVDLDL VRSRRLARFT TKSTAADSSG AVAETSATAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACCTGC GTAGAGCTCA TAGAGAGCGC ATGGCAAGGG GCATCGATCC CGTGGACGCT 60
GGCGTCCGCT GCGGATGTCC TGCACGTGAG GCACCGGCAA CGCGTTCCGT GCTGAAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

cme:CYME_CMS041C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000585	Aegilops tauschii	32.59	1.00e-89	321.00
IUUC-Aml-002396	Ailuropoda melanoleuca	32.40	2.00e-80	291.00
IUUC-Atr-002479	Amborella trichopoda	32.35	5.00e-85	306.00
IUUC-Apl-003747	Anas platyrhynchos	31.91	7.00e-80	290.00
IUUC-Aca-004866	Anolis carolinensis	32.20	3.00e-82	298.00
IUUC-Aly-006300	Arabidopsis lyrata	29.52	4.00e-88	317.00
IUUC-Ath-006962	Arabidopsis thaliana	31.66	3.00e-84	304.00
IUUC-Ago-007880	Ashbya gossypii	28.39	1.00e-76	279.00
IUUC-Acl-008289	Aspergillus clavatus	30.99	3.00e-84	304.00
IUUC-Afl-008711	Aspergillus flavus	32.09	8.00e-90	323.00
IUUC-Afu-008766	Aspergillus fumigatus	31.87	3.00e-87	314.00
IUUC-Ani-009126	Aspergillus nidulans	31.18	7.00e-87	313.00
IUUC-Ang-009837	Aspergillus niger	31.52	2.00e-89	321.00
IUUC-Aor-009919	Aspergillus oryzae	32.09	2.00e-89	322.00
IUUC-Ate-010300	Aspergillus terreus	31.70	2.00e-86	312.00
IUUC-Ame-011355	Astyanax mexicanus	31.62	3.00e-85	308.00
IUUC-Bgr-011995	Blumeria graminis	29.04	4.00e-95	340.00
IUUC-Bta-013056	Bos taurus	32.45	2.00e-80	292.00
IUUC-Bci-013605	Botrytis cinerea	30.56	4.00e-86	310.00
IUUC-Bdi-015032	Brachypodium distachyon	31.13	3.00e-87	314.00
IUUC-Bol-016124	Brassica oleracea	29.96	6.00e-92	330.00
IUUC-Bra-017426	Brassica rapa	30.32	3.00e-92	331.00
IUUC-Cel-018606	Caenorhabditis elegans	28.83	2.00e-48	184.00
IUUC-Cja-018872	Callithrix jacchus	33.24	1.00e-80	292.00
IUUC-Cfa-020045	Canis familiaris	32.40	4.00e-80	291.00
IUUC-Cpo-022309	Cavia porcellus	33.10	1.00e-80	292.00
IUUC-Cre-022726	Chlamydomonas reinhardtii	32.42	6.00e-44	169.00
IUUC-Csa-023765	Chlorocebus sabaeus	30.70	2.00e-66	244.00
IUUC-Cho-024614	Choloepus hoffmanni	35.97	2.00e-61	228.00
IUUC-Cin-025533	Ciona intestinalis	30.80	3.00e-89	320.00
IUUC-Csv-026081	Ciona savignyi	39.18	4.00e-33	131.00
IUUC-Cgl-026710	Colletotrichum gloeosporioides	27.39	7.00e-88	316.00
IUUC-Cne-027098	Cryptococcus neoformans	29.70	6.00e-75	273.00
IUUC-Dre-027979	Danio rerio	31.19	7.00e-80	290.00
IUUC-Dno-029282	Dasypus novemcinctus	32.12	7.00e-80	290.00
IUUC-Dor-030421	Dipodomys ordii	28.91	1.00e-56	212.00
IUUC-Dse-031393	Dothistroma septosporum	29.37	8.00e-86	309.00
IUUC-Dme-031666	Drosophila melanogaster	29.73	2.00e-82	298.00
IUUC-Ete-032519	Echinops telfairi	40.36	3.00e-62	231.00
IUUC-Eca-033778	Equus caballus	32.36	2.00e-77	282.00
IUUC-Eeu-035315	Erinaceus europaeus	44.95	2.00e-36	145.00
IUUC-Fca-035658	Felis catus	32.35	4.00e-79	287.00
IUUC-Fal-037638	Ficedula albicollis	31.78	1.00e-81	296.00
IUUC-Fox-037909	Fusarium oxysporum	29.63	7.00e-13	67.00
IUUC-Fso-038406	Fusarium solani	31.05	2.00e-81	296.00
IUUC-Gmo-039379	Gadus morhua	31.27	2.00e-81	295.00
IUUC-Ggr-039851	Gaeumannomyces graminis	30.03	4.00e-82	297.00
IUUC-Gga-041136	Gallus gallus	31.90	5.00e-81	294.00
IUUC-Gac-041910	Gasterosteus aculeatus	31.46	4.00e-83	300.00
IUUC-Gma-043587	Glycine max	29.20	2.00e-90	324.00
IUUC-Ggo-045354	Gorilla gorilla	31.93	1.00e-72	266.00
IUUC-Hsa-046880	Homo sapiens	32.40	7.00e-81	293.00
IUUC-Hvu-047157	Hordeum vulgare	32.32	1.00e-86	312.00
IUUC-Itr-048469	Ictidomys tridecemlineatus	35.87	2.00e-62	230.00
IUUC-Kpa-049211	Komagataella pastoris	33.12	2.00e-65	241.00
IUUC-Lch-050534	Latimeria chalumnae	31.14	6.00e-80	290.00
IUUC-Lpe-051022	Leersia perrieri	32.18	7.00e-89	319.00
IUUC-Loc-052622	Lepisosteus oculatus	31.18	1.00e-78	286.00
IUUC-Lma-053241	Leptosphaeria maculans	31.02	2.00e-86	311.00
IUUC-Laf-053646	Loxodonta africana	33.38	4.00e-81	294.00
IUUC-Mcc-055588	Macaca mulatta	32.40	1.00e-80	292.00
IUUC-Meu-055991	Macropus eugenii	34.82	5.00e-60	224.00
IUUC-Mor-057064	Magnaporthe oryzae	30.57	2.00e-89	322.00
IUUC-Mpo-057452	Magnaporthe poae	29.78	5.00e-81	293.00
IUUC-Mtr-058016	Medicago truncatula	28.60	7.00e-89	320.00
IUUC-Mla-058887	Melampsora laricipopulina	31.26	3.00e-83	301.00
IUUC-Mga-059497	Meleagris gallopavo	31.90	7.00e-81	293.00
IUUC-Mvi-060343	Microbotryum violaceum	29.00	9.00e-77	279.00
IUUC-Mmr-061173	Microcebus murinus	36.72	2.00e-72	265.00
IUUC-Mdo-062102	Monodelphis domestica	32.60	1.00e-81	296.00
IUUC-Mmu-063223	Mus musculus	33.24	2.00e-81	295.00
IUUC-Mac-065531	Musa acuminata	28.92	6.00e-92	330.00
IUUC-Mpu-066444	Mustela putorius furo	28.75	2.00e-58	219.00
IUUC-Mlu-068018	Myotis lucifugus	32.40	3.00e-80	291.00
IUUC-Nfi-068590	Neosartorya fischeri	31.76	2.00e-87	315.00
IUUC-Ncr-068901	Neurospora crassa	27.89	4.00e-80	290.00
IUUC-Nle-069605	Nomascus leucogenys	32.26	1.00e-79	289.00
IUUC-Opr-071011	Ochotona princeps	39.10	1.00e-58	219.00
IUUC-Ont-072304	Oreochromis niloticus	30.82	2.00e-77	282.00
IUUC-Oan-073410	Ornithorhynchus anatinus	34.35	3.00e-74	270.00
IUUC-Ocu-074910	Oryctolagus cuniculus	33.10	3.00e-82	298.00
IUUC-Oba-075073	Oryza barthii	31.59	2.00e-93	334.00
IUUC-Obr-076452	Oryza brachyantha	32.32	3.00e-94	337.00
IUUC-Ogl-077141	Oryza glaberrima	31.59	3.00e-93	334.00
IUUC-Ogu-078116	Oryza glumaepatula	31.59	8.00e-93	332.00
IUUC-Oin-079066	Oryza indica	31.59	2.00e-93	334.00
IUUC-Olo-080253	Oryza longistaminata	29.73	2.00e-80	291.00
IUUC-Ome-081263	Oryza meridionalis	31.13	2.00e-92	332.00
IUUC-Oni-082019	Oryza nivara	31.59	4.00e-93	333.00
IUUC-Opu-083558	Oryza punctata	32.69	8.00e-97	346.00
IUUC-Oru-085002	Oryza rufipogon	31.59	5.00e-93	333.00
IUUC-Osa-085980	Oryza sativa	31.73	2.00e-93	335.00
IUUC-Ola-086323	Oryzias latipes	31.01	1.00e-83	303.00
IUUC-Olu-087901	Ostreococcus lucimarinus	31.57	5.00e-75	273.00
IUUC-Oga-087969	Otolemur garnettii	32.35	4.00e-77	281.00
IUUC-Oar-090020	Ovis aries	32.45	2.00e-80	292.00
IUUC-Ptr-091589	Pan troglodytes	32.40	7.00e-81	293.00
IUUC-Pan-092271	Papio anubis	30.58	6.00e-67	246.00
IUUC-Psi-093013	Pelodiscus sinensis	31.28	1.00e-79	289.00
IUUC-Pma-094627	Petromyzon marinus	38.77	3.00e-75	273.00
IUUC-Pno-094840	Phaeosphaeria nodorum	31.81	2.00e-94	338.00
IUUC-Ppa-095989	Physcomitrella patens	31.80	3.00e-83	300.00
IUUC-Pfo-096436	Poecilia formosa	31.14	3.00e-84	304.00
IUUC-Pab-098275	Pongo abelii	33.39	3.00e-73	268.00
IUUC-Pop-098797	Populus trichocarpa	29.00	7.00e-94	336.00
IUUC-Pca-100762	Procavia capensis	29.97	2.00e-63	234.00
IUUC-Ppe-101230	Prunus persica	29.73	2.00e-89	322.00
IUUC-Pva-102459	Pteropus vampyrus	32.63	3.00e-79	288.00
IUUC-Pgr-103485	Puccinia graminis	30.98	8.00e-86	309.00
IUUC-Ptt-104001	Puccinia triticina	36.06	3.00e-33	134.00
IUUC-Pte-104084	Pyrenophora teres	31.99	2.00e-97	348.00
IUUC-Pyt-104484	Pyrenophora triticirepentis	29.09	4.00e-98	350.00
IUUC-Rno-105719	Rattus norvegicus	32.95	3.00e-81	294.00
IUUC-Sce-106135	Saccharomyces cerevisiae	35.27	2.00e-64	238.00
IUUC-Sha-106760	Sarcophilus harrisii	32.47	2.00e-81	295.00
IUUC-Sja-107698	Schizosaccharomyces japonicus	31.95	3.00e-81	294.00
IUUC-Spo-108076	Schizosaccharomyces pombe	30.93	3.00e-78	284.00
IUUC-Ssl-108624	Sclerotinia sclerotiorum	30.49	1.00e-88	318.00
IUUC-Smo-108769	Selaginella moellendorffii	28.56	4.00e-81	293.00
IUUC-Sit-109949	Setaria italica	31.57	2.00e-90	324.00
IUUC-Sly-110848	Solanum lycopersicum	37.59	4.00e-70	256.00
IUUC-Stu-112372	Solanum tuberosum	29.98	8.00e-90	322.00
IUUC-Sar-113131	Sorex araneus	33.41	5.00e-50	190.00
IUUC-Sbi-113828	Sorghum bicolor	32.36	5.00e-94	337.00
IUUC-Sre-114967	Sporisorium reilianum	31.78	2.00e-91	328.00
IUUC-Ssc-115841	Sus scrofa	30.39	1.00e-66	246.00
IUUC-Tgu-117290	Taeniopygia guttata	31.78	8.00e-80	290.00
IUUC-Tru-118193	Takifugu rubripes	31.79	2.00e-79	288.00
IUUC-Tsy-118926	Tarsius syrichta	32.40	2.00e-80	291.00
IUUC-Tni-120862	Tetraodon nigroviridis	30.76	4.00e-79	287.00
IUUC-Tca-121096	Theobroma cacao	28.80	4.00e-89	320.00
IUUC-Tre-122104	Trichoderma reesei	31.13	9.00e-87	313.00
IUUC-Tvi-122345	Trichoderma virens	30.19	4.00e-85	308.00
IUUC-Tae-124839	Triticum aestivum	32.59	2.00e-89	321.00
IUUC-Tur-126056	Triticum urartu	32.59	2.00e-89	321.00
IUUC-Tme-127074	Tuber melanosporum	27.17	4.00e-81	294.00
IUUC-Tbe-127533	Tupaia belangeri	32.62	8.00e-79	286.00
IUUC-Ttr-128757	Tursiops truncatus	33.10	6.00e-79	286.00
IUUC-Uma-129550	Ustilago maydis	31.41	6.00e-92	330.00
IUUC-Vda-129901	Verticillium dahliae	28.05	1.00e-91	328.00
IUUC-Vpa-130636	Vicugna pacos	37.01	3.00e-72	265.00
IUUC-Vvi-130891	Vitis vinifera	29.80	2.00e-87	314.00
IUUC-Xtr-132364	Xenopus tropicalis	30.81	6.00e-78	283.00
IUUC-Xma-133772	Xiphophorus maculatus	31.24	5.00e-84	304.00
IUUC-Yli-134506	Yarrowia lipolytica	28.70	5.00e-81	293.00
IUUC-Zma-135557	Zea mays	31.86	4.00e-89	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence