iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095800

Ensembl Protein ID

PP1S12_351V6.1

UniProt Accession

A9RJC1; A9RJC1_PHYPA

Genbank Protein ID

EDQ81126.1

Protein Name

Nucleosome remodeling factor, p48 subunit

Genbank Nucleotide ID

DS544901

Gene Name

NFC1501; PHYPADRAFT_159414

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S12_351V6	PP1S12_351V6.1	PP1S12_351V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-35	118.6	273	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H+++v+claf   +++ l++Gs D t+ ++Dlr
   Q: 273  HQAEVNCLAFnpkNEWVLATGSADRTVALYDLR 305
           99*********866699**************97 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAKEEDEYRD EMEERLVNEE YKIWKKNTPF LYDLVITHAL EWPSLTVQWL PNREEVGGKD 60
FSLQRLIVGT HTSDNEPNYL MIAQVQLPLE DSENNARQYD DERGEMGGFG CSSGKVQVVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGCCCAGA GCTCGCTCCC TCGCTCTGTC GCTCACTCCC ATCGCTTCGC ATCGCAGCGA 60
CGCCCAATTC TAGGATGGTT TATTAGTTTG GTTTAGCAGA GAGTGAGGGC GATAGGGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

ppp:PHYPADRAFT_159414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	68.88	2.00e-169	587.00
IUUC-Aml-001339	Ailuropoda melanoleuca	67.08	2.00e-168	584.00
IUUC-Atr-003075	Amborella trichopoda	81.00	0.00e+00	725.00
IUUC-Apl-003952	Anas platyrhynchos	67.81	2.00e-172	597.00
IUUC-Aca-004508	Anolis carolinensis	67.81	2.00e-172	597.00
IUUC-Aly-006342	Arabidopsis lyrata	76.08	0.00e+00	674.00
IUUC-Ath-006855	Arabidopsis thaliana	75.71	0.00e+00	674.00
IUUC-Ago-007892	Ashbya gossypii	36.08	2.00e-70	259.00
IUUC-Acl-008163	Aspergillus clavatus	50.76	3.00e-117	414.00
IUUC-Afl-008645	Aspergillus flavus	50.75	9.00e-117	412.00
IUUC-Afu-009091	Aspergillus fumigatus	50.76	1.00e-116	412.00
IUUC-Ani-009478	Aspergillus nidulans	48.48	2.00e-100	358.00
IUUC-Ang-009707	Aspergillus niger	50.00	3.00e-113	400.00
IUUC-Aor-010028	Aspergillus oryzae	50.75	9.00e-117	412.00
IUUC-Ate-010416	Aspergillus terreus	49.51	2.00e-117	415.00
IUUC-Ame-010598	Astyanax mexicanus	65.71	3.00e-171	593.00
IUUC-Bgr-012001	Blumeria graminis	45.32	5.00e-98	350.00
IUUC-Bta-012851	Bos taurus	67.39	6.00e-174	602.00
IUUC-Bci-013815	Botrytis cinerea	46.89	7.00e-117	413.00
IUUC-Bdi-014926	Brachypodium distachyon	76.60	0.00e+00	666.00
IUUC-Bol-015856	Brassica oleracea	76.24	0.00e+00	679.00
IUUC-Bra-016725	Brassica rapa	73.21	0.00e+00	668.00
IUUC-Cel-018587	Caenorhabditis elegans	61.52	2.00e-149	521.00
IUUC-Cja-019884	Callithrix jacchus	67.39	6.00e-174	602.00
IUUC-Cfa-020343	Canis familiaris	67.39	6.00e-174	602.00
IUUC-Cpo-021591	Cavia porcellus	67.39	6.00e-174	602.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	71.26	0.00e+00	634.00
IUUC-Csa-023738	Chlorocebus sabaeus	64.73	7.00e-166	575.00
IUUC-Cho-024506	Choloepus hoffmanni	67.39	4.00e-172	596.00
IUUC-Cin-025589	Ciona intestinalis	64.83	2.00e-170	590.00
IUUC-Csv-026216	Ciona savignyi	64.73	4.00e-169	587.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	45.83	5.00e-109	387.00
IUUC-Cne-026792	Cryptococcus neoformans	54.14	7.00e-134	469.00
IUUC-Cme-027307	Cyanidioschyzon merolae	52.19	3.00e-128	451.00
IUUC-Dre-028742	Danio rerio	66.19	4.00e-172	596.00
IUUC-Dno-029114	Dasypus novemcinctus	67.39	6.00e-174	602.00
IUUC-Dor-030733	Dipodomys ordii	57.49	1.00e-136	479.00
IUUC-Dse-031282	Dothistroma septosporum	44.56	7.00e-100	357.00
IUUC-Dme-032126	Drosophila melanogaster	66.59	2.00e-171	594.00
IUUC-Ete-032731	Echinops telfairi	67.39	6.00e-174	602.00
IUUC-Eca-033533	Equus caballus	66.58	1.00e-167	581.00
IUUC-Eeu-034644	Erinaceus europaeus	64.25	1.00e-84	305.00
IUUC-Fca-036202	Felis catus	67.39	6.00e-174	602.00
IUUC-Fal-037084	Ficedula albicollis	67.81	2.00e-172	597.00
IUUC-Fox-037974	Fusarium oxysporum	47.18	8.00e-118	416.00
IUUC-Fso-038246	Fusarium solani	44.29	3.00e-103	367.00
IUUC-Gmo-039214	Gadus morhua	66.27	1.00e-171	594.00
IUUC-Ggr-039741	Gaeumannomyces graminis	44.95	3.00e-105	374.00
IUUC-Gga-040396	Gallus gallus	67.39	6.00e-174	602.00
IUUC-Gac-041389	Gasterosteus aculeatus	65.87	4.00e-170	590.00
IUUC-Gma-042791	Glycine max	77.86	0.00e+00	673.00
IUUC-Ggo-045422	Gorilla gorilla	63.72	4.00e-154	536.00
IUUC-Hsa-045683	Homo sapiens	67.39	6.00e-174	602.00
IUUC-Hvu-047457	Hordeum vulgare	76.29	7.00e-87	311.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	67.39	6.00e-174	602.00
IUUC-Kpa-049119	Komagataella pastoris	36.05	8.00e-71	259.00
IUUC-Lch-050545	Latimeria chalumnae	66.02	3.00e-170	590.00
IUUC-Lpe-051337	Leersia perrieri	77.59	0.00e+00	674.00
IUUC-Loc-052473	Lepisosteus oculatus	66.90	3.00e-173	600.00
IUUC-Lma-053275	Leptosphaeria maculans	44.15	4.00e-71	260.00
IUUC-Laf-054114	Loxodonta africana	67.39	6.00e-174	602.00
IUUC-Mcc-055648	Macaca mulatta	67.39	9.00e-173	598.00
IUUC-Meu-056490	Macropus eugenii	67.39	6.00e-174	602.00
IUUC-Mor-056947	Magnaporthe oryzae	47.24	2.00e-106	378.00
IUUC-Mpo-057602	Magnaporthe poae	46.28	4.00e-106	377.00
IUUC-Mtr-057853	Medicago truncatula	76.83	0.00e+00	657.00
IUUC-Mla-058884	Melampsora laricipopulina	52.87	1.00e-130	458.00
IUUC-Mga-059452	Meleagris gallopavo	67.81	2.00e-172	597.00
IUUC-Mvi-060450	Microbotryum violaceum	56.68	2.00e-134	471.00
IUUC-Mmr-060678	Microcebus murinus	66.67	5.00e-168	582.00
IUUC-Mdo-062817	Monodelphis domestica	65.70	2.00e-168	584.00
IUUC-Mmu-063282	Mus musculus	67.39	6.00e-174	602.00
IUUC-Mac-065480	Musa acuminata	77.73	0.00e+00	677.00
IUUC-Mpu-066529	Mustela putorius furo	67.15	6.00e-173	599.00
IUUC-Mlu-068072	Myotis lucifugus	67.39	6.00e-174	602.00
IUUC-Nfi-068374	Neosartorya fischeri	50.76	5.00e-114	403.00
IUUC-Ncr-068794	Neurospora crassa	46.62	3.00e-110	391.00
IUUC-Nle-069577	Nomascus leucogenys	67.39	6.00e-174	602.00
IUUC-Opr-070245	Ochotona princeps	55.07	3.00e-132	464.00
IUUC-Ont-071809	Oreochromis niloticus	65.56	2.00e-171	593.00
IUUC-Oan-072839	Ornithorhynchus anatinus	67.65	3.00e-171	593.00
IUUC-Ocu-074778	Oryctolagus cuniculus	64.73	7.00e-166	575.00
IUUC-Oba-075719	Oryza barthii	65.49	1.00e-165	575.00
IUUC-Obr-076859	Oryza brachyantha	77.40	0.00e+00	668.00
IUUC-Ogl-077920	Oryza glaberrima	77.59	0.00e+00	673.00
IUUC-Ogu-078048	Oryza glumaepatula	65.49	1.00e-164	572.00
IUUC-Oin-079960	Oryza indica	63.41	2.00e-151	528.00
IUUC-Olo-080553	Oryza longistaminata	63.00	2.00e-161	561.00
IUUC-Ome-081835	Oryza meridionalis	77.59	0.00e+00	676.00
IUUC-Oni-082494	Oryza nivara	65.26	9.00e-164	569.00
IUUC-Opu-083913	Oryza punctata	74.38	0.00e+00	630.00
IUUC-Oru-084666	Oryza rufipogon	77.59	0.00e+00	673.00
IUUC-Osa-085884	Oryza sativa	77.59	0.00e+00	673.00
IUUC-Ola-086664	Oryzias latipes	65.79	4.00e-171	593.00
IUUC-Olu-087579	Ostreococcus lucimarinus	70.20	1.00e-167	582.00
IUUC-Oga-088364	Otolemur garnettii	62.59	8.00e-159	552.00
IUUC-Oar-089652	Ovis aries	67.39	6.00e-174	602.00
IUUC-Ptr-091598	Pan troglodytes	65.11	1.00e-165	575.00
IUUC-Pan-092412	Papio anubis	64.73	7.00e-166	575.00
IUUC-Psi-093300	Pelodiscus sinensis	67.02	1.00e-157	548.00
IUUC-Pma-094307	Petromyzon marinus	66.03	1.00e-171	595.00
IUUC-Pno-095153	Phaeosphaeria nodorum	45.97	1.00e-105	376.00
IUUC-Pfo-097376	Poecilia formosa	65.40	4.00e-170	589.00
IUUC-Pab-097697	Pongo abelii	67.39	6.00e-174	602.00
IUUC-Pop-099709	Populus trichocarpa	76.48	0.00e+00	693.00
IUUC-Pca-100642	Procavia capensis	58.77	3.00e-143	500.00
IUUC-Ppe-101212	Prunus persica	77.22	0.00e+00	678.00
IUUC-Pva-102253	Pteropus vampyrus	67.39	6.00e-174	602.00
IUUC-Pgr-103441	Puccinia graminis	51.96	8.00e-126	442.00
IUUC-Pte-104332	Pyrenophora teres	46.04	1.00e-108	385.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	46.04	2.00e-108	385.00
IUUC-Rno-105678	Rattus norvegicus	67.39	6.00e-174	602.00
IUUC-Sce-106364	Saccharomyces cerevisiae	38.42	3.00e-68	251.00
IUUC-Sha-106663	Sarcophilus harrisii	67.81	2.00e-172	597.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	45.50	7.00e-105	373.00
IUUC-Spo-108145	Schizosaccharomyces pombe	48.18	4.00e-112	397.00
IUUC-Smo-109159	Selaginella moellendorffii	78.89	0.00e+00	696.00
IUUC-Sit-110144	Setaria italica	76.96	0.00e+00	647.00
IUUC-Sly-111680	Solanum lycopersicum	77.01	0.00e+00	698.00
IUUC-Stu-111931	Solanum tuberosum	77.62	0.00e+00	685.00
IUUC-Sar-113236	Sorex araneus	59.46	8.00e-143	499.00
IUUC-Sbi-114637	Sorghum bicolor	77.21	0.00e+00	671.00
IUUC-Sre-114980	Sporisorium reilianum	51.67	4.00e-135	473.00
IUUC-Ssc-116352	Sus scrofa	65.36	6.00e-166	576.00
IUUC-Tgu-116925	Taeniopygia guttata	67.57	2.00e-172	597.00
IUUC-Tru-117549	Takifugu rubripes	65.01	2.00e-168	583.00
IUUC-Tsy-118854	Tarsius syrichta	65.11	2.00e-165	574.00
IUUC-Tni-120398	Tetraodon nigroviridis	65.25	7.00e-170	589.00
IUUC-Tca-121841	Theobroma cacao	77.14	0.00e+00	680.00
IUUC-Tre-122190	Trichoderma reesei	48.57	9.00e-110	389.00
IUUC-Tvi-122304	Trichoderma virens	47.96	3.00e-118	417.00
IUUC-Tae-124648	Triticum aestivum	76.35	0.00e+00	639.00
IUUC-Tur-126850	Triticum urartu	67.97	5.00e-140	490.00
IUUC-Tme-126949	Tuber melanosporum	49.87	2.00e-119	421.00
IUUC-Tbe-128010	Tupaia belangeri	58.23	2.00e-142	498.00
IUUC-Ttr-128558	Tursiops truncatus	59.46	2.00e-145	508.00
IUUC-Uma-129424	Ustilago maydis	52.71	1.00e-136	478.00
IUUC-Vda-129873	Verticillium dahliae	46.54	7.00e-114	403.00
IUUC-Vpa-130079	Vicugna pacos	67.15	3.00e-172	597.00
IUUC-Vvi-131585	Vitis vinifera	77.20	0.00e+00	681.00
IUUC-Xtr-132005	Xenopus tropicalis	66.18	1.00e-168	584.00
IUUC-Xma-133066	Xiphophorus maculatus	65.56	2.00e-171	593.00
IUUC-Yli-134334	Yarrowia lipolytica	35.63	6.00e-76	277.00
IUUC-Zma-135710	Zea mays	76.47	0.00e+00	645.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence