iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002559

Ensembl Protein ID

ERN01436

UniProt Accession

W1P1I6; W1P1I6_AMBTC

Genbank Protein ID

ERN01436.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

KI394767

Gene Name

AMTR_s00002p00266760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00002p00266760	ERN01436	ERN01436

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.00e-15	57.2	123	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrll 80
            vkvs++g+++++++dl+ + +++dL + +++ +                        l++se+ ++YeD dGD++ l++D++++++v+      s+ rl+
   Q: 123  YVKVSMDGAPYLRKVDLNMYKSYQDLSNSLEKmFScftmgqcgsqginflnesklmdLLNGSEYVPTYEDRDGDWM-LVGDVPWEMFVD------SCRRLR 216
           69******************************722566999***************99999***************.************......****** PP
   S: 81   iqk 83
           i+k
   Q: 217  IMK 219
           *98 PP

Organism

Amborella trichopoda

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MATDLSLNFE ATELRLGPPG NGDSAGKGIG KRGFSETVDL KLNLMEPAPL DVPASTVKDT 60
GVDLTEKLRG SNAVADPAKP PAHKAQVVGW PPVRSFRRNM LATQSSKGNN RSEEGEKNAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACTG ATCTGAGTCT TAACTTTGAG GCGACGGAAC TCCGTTTGGG GCCGCCGGGA 60
AATGGAGATT CCGCCGGTAA GGGTATCGGG AAGCGGGGGT TTTCAGAGAC GGTGGATTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

atr:18429518

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	60.25	1.00e-49	187.00
IUUC-Aly-006188	Arabidopsis lyrata	57.43	1.00e-67	247.00
IUUC-Ath-007356	Arabidopsis thaliana	60.64	9.00e-75	271.00
IUUC-Bdi-014859	Brachypodium distachyon	60.00	1.00e-73	267.00
IUUC-Bol-016371	Brassica oleracea	61.48	6.00e-74	268.00
IUUC-Bra-016936	Brassica rapa	61.48	1.00e-73	267.00
IUUC-Gma-043505	Glycine max	64.73	2.00e-81	293.00
IUUC-Hvu-047087	Hordeum vulgare	77.42	7.00e-70	254.00
IUUC-Lpe-050724	Leersia perrieri	48.68	9.00e-46	175.00
IUUC-Mor-056984	Magnaporthe oryzae	35.90	4.30e+00	25.80
IUUC-Mtr-058641	Medicago truncatula	61.73	8.00e-77	278.00
IUUC-Mac-065450	Musa acuminata	63.64	3.00e-71	259.00
IUUC-Oba-075945	Oryza barthii	73.84	2.00e-69	254.00
IUUC-Obr-076745	Oryza brachyantha	59.07	2.00e-71	260.00
IUUC-Ogl-077429	Oryza glaberrima	56.85	2.00e-66	244.00
IUUC-Ogu-078911	Oryza glumaepatula	56.54	5.00e-74	269.00
IUUC-Oin-079136	Oryza indica	73.26	3.00e-69	253.00
IUUC-Ome-081785	Oryza meridionalis	56.97	5.00e-47	179.00
IUUC-Oni-082674	Oryza nivara	73.26	2.00e-69	254.00
IUUC-Opu-083338	Oryza punctata	53.49	4.00e-47	179.00
IUUC-Oru-084731	Oryza rufipogon	58.39	1.00e-46	178.00
IUUC-Osa-086164	Oryza sativa	73.26	3.00e-69	253.00
IUUC-Pop-099218	Populus trichocarpa	64.20	2.00e-81	294.00
IUUC-Ppe-101719	Prunus persica	68.08	2.00e-75	273.00
IUUC-Sit-110063	Setaria italica	60.90	1.00e-76	278.00
IUUC-Sly-111769	Solanum lycopersicum	64.14	9.00e-80	288.00
IUUC-Stu-112038	Solanum tuberosum	64.90	1.00e-77	281.00
IUUC-Sbi-114725	Sorghum bicolor	59.27	5.00e-73	266.00
IUUC-Tca-121532	Theobroma cacao	66.80	6.00e-82	295.00
IUUC-Tre-122196	Trichoderma reesei	34.00	8.20e-01	27.70
IUUC-Tae-124253	Triticum aestivum	76.33	3.00e-71	259.00
IUUC-Tur-126762	Triticum urartu	55.06	7.00e-63	232.00
IUUC-Vvi-131458	Vitis vinifera	66.12	2.00e-79	287.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence