iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126324

Ensembl Protein ID

TRIUR3_24904-P1

UniProt Accession

M8APX3; M8APX3_TRIUA

Genbank Protein ID

EMS63029.1

Protein Name

CCR4-NOT transcription complex subunit 4

Genbank Nucleotide ID

KD074506

Gene Name

TRIUR3_24904

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_24904	TRIUR3_24904-T1	TRIUR3_24904-P1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.07	2.00e-49	192.00	IUUC-Sce-106312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Triticum urartu

Protein Sequence
(Fasta)

MTMSDDGDRT CPLCAEEMDI TDQQLKPCKC GYEICVWCWH HIIDMAEKED TEGRCPACRT 60
RYDKDRIVKM AATCDRTVAD KNTDKKQKTQ KVKSKTLTVE AKKHLASVRV IQRNLVYIIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGATGA GCGATGACGG AGACCGCACC TGCCCGCTCT GCGCCGAGGA GATGGACATC 60
ACTGACCAGC AACTCAAGCC CTGCAAATGT GGCTACGAGG TACTATCCTC ATCAGTGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0694--RNA-binding

Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1

SMART

SM00361--RRM_1

Gene Ontology

GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000464	Aegilops tauschii	98.24	0.00e+00	2135.00
IUUC-Aml-002384	Ailuropoda melanoleuca	43.36	2.00e-54	206.00
IUUC-Atr-002462	Amborella trichopoda	62.42	4.00e-124	438.00
IUUC-Apl-003756	Anas platyrhynchos	43.36	1.00e-55	210.00
IUUC-Aca-004643	Anolis carolinensis	43.36	1.00e-55	210.00
IUUC-Aly-006093	Arabidopsis lyrata	58.92	2.00e-111	395.00
IUUC-Ath-007371	Arabidopsis thaliana	61.04	2.00e-113	402.00
IUUC-Ago-007799	Ashbya gossypii	39.83	1.00e-53	203.00
IUUC-Acl-008077	Aspergillus clavatus	39.41	5.00e-47	182.00
IUUC-Afl-008720	Aspergillus flavus	36.09	6.00e-53	202.00
IUUC-Afu-008905	Aspergillus fumigatus	37.65	2.00e-48	187.00
IUUC-Ani-009264	Aspergillus nidulans	36.78	1.00e-34	140.00
IUUC-Ang-009537	Aspergillus niger	36.07	2.00e-52	200.00
IUUC-Aor-010123	Aspergillus oryzae	37.00	1.00e-33	138.00
IUUC-Ate-010409	Aspergillus terreus	35.29	5.00e-52	199.00
IUUC-Ame-011538	Astyanax mexicanus	43.36	9.00e-47	181.00
IUUC-Bgr-012062	Blumeria graminis	34.77	4.00e-52	199.00
IUUC-Bta-012419	Bos taurus	43.36	4.00e-55	208.00
IUUC-Bci-013633	Botrytis cinerea	38.02	1.00e-51	198.00
IUUC-Bdi-014913	Brachypodium distachyon	82.72	0.00e+00	1816.00
IUUC-Bol-016407	Brassica oleracea	60.96	8.00e-117	414.00
IUUC-Bra-017755	Brassica rapa	61.56	4.00e-116	411.00
IUUC-Cel-018123	Caenorhabditis elegans	37.71	3.00e-50	192.00
IUUC-Cja-019705	Callithrix jacchus	43.36	3.00e-55	209.00
IUUC-Cfa-020440	Canis familiaris	43.36	3.00e-55	209.00
IUUC-Cpo-022091	Cavia porcellus	42.48	7.00e-54	204.00
IUUC-Csa-024202	Chlorocebus sabaeus	43.36	4.00e-55	208.00
IUUC-Cho-024410	Choloepus hoffmanni	40.54	3.00e-37	149.00
IUUC-Cin-025558	Ciona intestinalis	41.41	3.00e-54	205.00
IUUC-Cgl-026687	Colletotrichum gloeosporioides	36.95	2.00e-48	186.00
IUUC-Cne-027084	Cryptococcus neoformans	34.94	2.00e-42	166.00
IUUC-Cme-027148	Cyanidioschyzon merolae	28.16	3.00e-22	99.40
IUUC-Dre-028377	Danio rerio	43.36	5.00e-47	181.00
IUUC-Dno-029100	Dasypus novemcinctus	43.36	2.00e-55	209.00
IUUC-Dor-030310	Dipodomys ordii	42.92	2.00e-49	189.00
IUUC-Dse-031514	Dothistroma septosporum	38.55	8.00e-50	191.00
IUUC-Dme-031735	Drosophila melanogaster	38.20	4.00e-51	195.00
IUUC-Ete-033091	Echinops telfairi	41.15	3.00e-49	189.00
IUUC-Eca-033506	Equus caballus	43.36	6.00e-55	207.00
IUUC-Eeu-034506	Erinaceus europaeus	38.94	4.00e-47	182.00
IUUC-Fca-036033	Felis catus	43.36	5.00e-55	207.00
IUUC-Fal-037540	Ficedula albicollis	43.36	7.00e-56	211.00
IUUC-Fox-037944	Fusarium oxysporum	39.59	3.00e-54	205.00
IUUC-Fso-038172	Fusarium solani	35.37	2.00e-44	174.00
IUUC-Gmo-039211	Gadus morhua	42.31	7.00e-47	181.00
IUUC-Ggr-040096	Gaeumannomyces graminis	38.78	2.00e-52	201.00
IUUC-Gga-040487	Gallus gallus	43.36	8.00e-56	211.00
IUUC-Gac-042294	Gasterosteus aculeatus	43.72	9.00e-47	181.00
IUUC-Gma-043229	Glycine max	64.48	6.00e-124	437.00
IUUC-Ggo-044950	Gorilla gorilla	48.91	8.00e-39	154.00
IUUC-Hsa-046666	Homo sapiens	43.36	9.00e-55	207.00
IUUC-Hvu-047405	Hordeum vulgare	95.59	0.00e+00	2139.00
IUUC-Itr-047888	Ictidomys tridecemlineatus	43.36	3.00e-51	194.00
IUUC-Kpa-049260	Komagataella pastoris	35.01	3.00e-51	195.00
IUUC-Lch-050203	Latimeria chalumnae	43.36	2.00e-55	209.00
IUUC-Lpe-051195	Leersia perrieri	56.61	0.00e+00	814.00
IUUC-Loc-052886	Lepisosteus oculatus	43.36	2.00e-47	183.00
IUUC-Lma-053073	Leptosphaeria maculans	36.13	4.00e-45	175.00
IUUC-Laf-053490	Loxodonta africana	43.36	4.00e-55	208.00
IUUC-Mcc-055724	Macaca mulatta	43.36	6.00e-55	207.00
IUUC-Meu-056787	Macropus eugenii	41.44	2.00e-21	96.70
IUUC-Mor-056921	Magnaporthe oryzae	37.50	7.00e-51	194.00
IUUC-Mpo-057616	Magnaporthe poae	38.78	5.00e-52	198.00
IUUC-Mtr-058426	Medicago truncatula	64.22	4.00e-116	412.00
IUUC-Mla-059146	Melampsora laricipopulina	34.48	1.00e-45	177.00
IUUC-Mga-059372	Meleagris gallopavo	43.36	1.00e-55	210.00
IUUC-Mvi-060479	Microbotryum violaceum	36.46	7.00e-35	142.00
IUUC-Mmr-061012	Microcebus murinus	43.36	3.00e-55	208.00
IUUC-Mdo-062330	Monodelphis domestica	43.36	2.00e-55	209.00
IUUC-Mmu-063894	Mus musculus	43.36	4.00e-55	208.00
IUUC-Mac-064805	Musa acuminata	76.76	4.00e-118	417.00
IUUC-Mpu-066894	Mustela putorius furo	43.36	3.00e-55	209.00
IUUC-Mlu-067321	Myotis lucifugus	43.36	6.00e-55	207.00
IUUC-Nfi-068451	Neosartorya fischeri	36.23	1.00e-48	188.00
IUUC-Ncr-068667	Neurospora crassa	37.80	2.00e-49	190.00
IUUC-Nle-070058	Nomascus leucogenys	42.92	3.00e-52	199.00
IUUC-Opr-071108	Ochotona princeps	47.66	5.00e-27	115.00
IUUC-Ont-071541	Oreochromis niloticus	44.02	4.00e-47	182.00
IUUC-Oan-073232	Ornithorhynchus anatinus	43.36	2.00e-55	209.00
IUUC-Ocu-074893	Oryctolagus cuniculus	43.36	5.00e-55	208.00
IUUC-Oba-075623	Oryza barthii	85.29	5.00e-85	306.00
IUUC-Obr-076653	Oryza brachyantha	66.41	0.00e+00	1406.00
IUUC-Ogl-077946	Oryza glaberrima	93.87	2.00e-115	407.00
IUUC-Ogu-078775	Oryza glumaepatula	91.33	4.00e-158	549.00
IUUC-Oin-079214	Oryza indica	59.90	0.00e+00	1206.00
IUUC-Olo-080799	Oryza longistaminata	74.89	1.00e-86	311.00
IUUC-Ome-081843	Oryza meridionalis	90.03	0.00e+00	630.00
IUUC-Oni-082944	Oryza nivara	85.29	7.00e-87	311.00
IUUC-Opu-083668	Oryza punctata	68.01	0.00e+00	1476.00
IUUC-Oru-084249	Oryza rufipogon	41.22	2.00e-57	216.00
IUUC-Osa-086233	Oryza sativa	68.21	0.00e+00	1483.00
IUUC-Ola-087121	Oryzias latipes	40.31	1.00e-47	184.00
IUUC-Olu-087772	Ostreococcus lucimarinus	41.59	6.00e-46	176.00
IUUC-Oga-088556	Otolemur garnettii	43.36	3.00e-55	208.00
IUUC-Oar-089768	Ovis aries	43.36	4.00e-55	208.00
IUUC-Ptr-090585	Pan troglodytes	43.36	6.00e-55	207.00
IUUC-Pan-092625	Papio anubis	43.36	5.00e-55	208.00
IUUC-Psi-093462	Pelodiscus sinensis	43.36	2.00e-55	209.00
IUUC-Pma-094468	Petromyzon marinus	38.19	2.00e-46	179.00
IUUC-Pno-094812	Phaeosphaeria nodorum	30.18	3.00e-22	100.00
IUUC-Pfo-096762	Poecilia formosa	37.90	1.00e-47	184.00
IUUC-Pab-097890	Pongo abelii	43.36	5.00e-55	208.00
IUUC-Pop-099764	Populus trichocarpa	65.52	5.00e-126	444.00
IUUC-Pca-101121	Procavia capensis	47.45	1.00e-34	140.00
IUUC-Ppe-102076	Prunus persica	66.08	1.00e-122	433.00
IUUC-Pva-102489	Pteropus vampyrus	43.36	4.00e-54	205.00
IUUC-Pgr-103568	Puccinia graminis	37.67	1.00e-41	164.00
IUUC-Ptt-103721	Puccinia triticina	29.71	2.00e-22	100.00
IUUC-Pte-104118	Pyrenophora teres	39.75	1.00e-49	190.00
IUUC-Pyt-104612	Pyrenophora triticirepentis	39.75	5.00e-50	191.00
IUUC-Rno-105627	Rattus norvegicus	43.36	4.00e-55	208.00
IUUC-Sce-106312	Saccharomyces cerevisiae	35.07	7.00e-50	191.00
IUUC-Sha-106619	Sarcophilus harrisii	43.36	2.00e-55	209.00
IUUC-Sja-107765	Schizosaccharomyces japonicus	40.87	1.00e-53	202.00
IUUC-Spo-108328	Schizosaccharomyces pombe	43.04	4.00e-55	207.00
IUUC-Ssl-108577	Sclerotinia sclerotiorum	36.88	3.00e-45	176.00
IUUC-Smo-108760	Selaginella moellendorffii	53.75	4.00e-81	293.00
IUUC-Sit-109923	Setaria italica	62.71	0.00e+00	1360.00
IUUC-Sly-110900	Solanum lycopersicum	55.71	2.00e-100	359.00
IUUC-Stu-112226	Solanum tuberosum	59.48	7.00e-101	360.00
IUUC-Sar-113620	Sorex araneus	43.36	3.00e-53	202.00
IUUC-Sbi-114318	Sorghum bicolor	64.03	0.00e+00	1349.00
IUUC-Sre-114956	Sporisorium reilianum	38.72	3.00e-55	209.00
IUUC-Ssc-116116	Sus scrofa	43.36	2.00e-51	194.00
IUUC-Tgu-117357	Taeniopygia guttata	43.36	8.00e-56	211.00
IUUC-Tru-118759	Takifugu rubripes	37.58	5.00e-47	181.00
IUUC-Tsy-119387	Tarsius syrichta	43.36	4.00e-54	205.00
IUUC-Tni-120536	Tetraodon nigroviridis	41.88	5.00e-47	181.00
IUUC-Tca-121035	Theobroma cacao	63.61	2.00e-124	439.00
IUUC-Tre-121996	Trichoderma reesei	35.37	3.00e-44	173.00
IUUC-Tvi-122371	Trichoderma virens	36.59	2.00e-49	191.00
IUUC-Tae-124373	Triticum aestivum	99.65	0.00e+00	1672.00
IUUC-Tme-127072	Tuber melanosporum	32.80	2.00e-38	154.00
IUUC-Tbe-128107	Tupaia belangeri	42.48	3.00e-51	195.00
IUUC-Ttr-128846	Tursiops truncatus	43.36	4.00e-54	205.00
IUUC-Uma-129607	Ustilago maydis	41.35	7.00e-55	208.00
IUUC-Vda-129971	Verticillium dahliae	36.20	9.00e-41	162.00
IUUC-Vpa-130298	Vicugna pacos	39.38	6.00e-43	168.00
IUUC-Vvi-131651	Vitis vinifera	60.30	7.00e-121	427.00
IUUC-Xtr-132728	Xenopus tropicalis	43.36	4.00e-55	208.00
IUUC-Xma-133789	Xiphophorus maculatus	40.31	4.00e-47	182.00
IUUC-Yli-134461	Yarrowia lipolytica	36.73	1.00e-44	172.00
IUUC-Zma-135031	Zea mays	62.68	0.00e+00	999.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence