iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109042

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, UFD2

Genbank Nucleotide ID

GL377569

Gene Name

UFD2-1; SELMODRAFT_142432

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_142432	EFJ34449	EFJ34449

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-22	78.3	941	1012

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +vpeefl+pI+++lM+dPv+lp s  t+dr++I+++l s+++ +P++r+ lt ++lvPn +l++ i++++   
   Q: 941  DVPEEFLDPIQYTLMKDPVILPsSKTTIDRATIQRHLLSDQT-DPFNRSLLTADMLVPNVELKARIEEFLRNA 1012
           69********************99*****************9.**************************9765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAIPKAERSL QEIEDLMLRR VLQLTLSPPA DASNAPSSNL VFLEQIAAEL MSEDRPMLLS 60
RDLIERALMD RLTTYFHARE EPLLYLIACY RRAVDEGRKS QAMKDKKSMV WIQETLNQVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCC CAAAGGCGGA GAGGAGCCTT CAGGAGATTG AAGATCTCAT GCTCCGCCGC 60
GTCTTGCAGC TCACTCTCTC GCCCCCAGCT GACGCGAGCA ATGCCCCTTC TTCCAATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0016874--F:ligase activity
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_142432

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000585	Aegilops tauschii	54.47	0.00e+00	867.00
IUUC-Atr-002479	Amborella trichopoda	58.11	0.00e+00	951.00
IUUC-Apl-003747	Anas platyrhynchos	28.63	7.00e-96	345.00
IUUC-Aly-006300	Arabidopsis lyrata	53.97	0.00e+00	989.00
IUUC-Ath-006962	Arabidopsis thaliana	54.06	0.00e+00	964.00
IUUC-Ago-007880	Ashbya gossypii	27.39	6.00e-82	298.00
IUUC-Acl-008289	Aspergillus clavatus	28.03	6.00e-108	384.00
IUUC-Afl-008711	Aspergillus flavus	28.04	8.00e-101	361.00
IUUC-Bdi-015032	Brachypodium distachyon	51.28	0.00e+00	929.00
IUUC-Bol-016124	Brassica oleracea	54.54	0.00e+00	1031.00
IUUC-Bra-017426	Brassica rapa	55.05	0.00e+00	1039.00
IUUC-Cel-018606	Caenorhabditis elegans	26.87	3.00e-57	216.00
IUUC-Cre-022726	Chlamydomonas reinhardtii	36.79	6.00e-54	204.00
IUUC-Cin-025533	Ciona intestinalis	31.11	5.00e-97	348.00
IUUC-Csv-026081	Ciona savignyi	38.92	3.00e-29	120.00
IUUC-Cgl-026710	Colletotrichum gloeosporioides	29.50	1.00e-108	387.00
IUUC-Dme-031666	Drosophila melanogaster	28.34	5.00e-86	312.00
IUUC-Eeu-035315	Erinaceus europaeus	43.78	2.00e-33	137.00
IUUC-Fox-037909	Fusarium oxysporum	28.51	1.00e-102	367.00
IUUC-Ggr-039851	Gaeumannomyces graminis	27.25	1.00e-94	340.00
IUUC-Hsa-046880	Homo sapiens	28.57	1.00e-90	327.00
IUUC-Hvu-047157	Hordeum vulgare	55.16	0.00e+00	838.00
IUUC-Lch-050534	Latimeria chalumnae	29.29	7.00e-95	342.00
IUUC-Lma-053241	Leptosphaeria maculans	27.24	2.00e-100	360.00
IUUC-Mcc-055588	Macaca mulatta	28.57	1.00e-90	328.00
IUUC-Mpo-057452	Magnaporthe poae	27.72	2.00e-96	347.00
IUUC-Mtr-058016	Medicago truncatula	53.94	0.00e+00	1070.00
IUUC-Mla-058887	Melampsora laricipopulina	33.05	1.00e-109	390.00
IUUC-Nfi-068590	Neosartorya fischeri	28.42	1.00e-108	387.00
IUUC-Ncr-068901	Neurospora crassa	26.73	1.00e-94	340.00
IUUC-Opr-071011	Ochotona princeps	39.04	6.00e-53	202.00
IUUC-Olu-087901	Ostreococcus lucimarinus	37.87	3.00e-167	581.00
IUUC-Pno-094840	Phaeosphaeria nodorum	27.25	2.00e-105	376.00
IUUC-Pop-100005	Populus trichocarpa	54.25	0.00e+00	1077.00
IUUC-Pyt-104484	Pyrenophora triticirepentis	28.36	3.00e-112	399.00
IUUC-Spo-108076	Schizosaccharomyces pombe	28.82	2.00e-87	316.00
IUUC-Sly-110973	Solanum lycopersicum	50.52	0.00e+00	866.00
IUUC-Stu-112372	Solanum tuberosum	53.82	0.00e+00	1074.00
IUUC-Tsy-118926	Tarsius syrichta	28.88	6.00e-92	332.00
IUUC-Tca-121096	Theobroma cacao	54.96	0.00e+00	1062.00
IUUC-Tre-122104	Trichoderma reesei	27.95	2.00e-102	367.00
IUUC-Tvi-122345	Trichoderma virens	28.50	1.00e-106	381.00
IUUC-Tae-124607	Triticum aestivum	50.87	0.00e+00	871.00
IUUC-Tur-126056	Triticum urartu	54.35	0.00e+00	865.00
IUUC-Uma-129550	Ustilago maydis	32.84	1.00e-111	397.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence