iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d018828	Zm00001d018828_T002	Zm00001d018828_T002
Zm00001d018828	Zm00001d018828_T003	Zm00001d018828_T003
Zm00001d018828	Zm00001d018828_T001	Zm00001d018828_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-106	358.1	255	873

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           Gl+NlgNtC+mNS +QcL+++p+l e++l  + +++n++np + +gel+ ++ +l+++lw+++ k v p+ ++++++ +a++f g++q+D
   Q: 255  GLENLGNTCFMNSSIQCLAHTPKLVEYFLGDYAKNINRTNPLGLNGELALAFGELLRSLWTTDGKPVPPHYFKEKIACFAPQFGGFNQHD 344
           9***************************************************************************************** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +qE+laflld+l+e+l++ k kp+ee+++++   ++e  de ++++  +n+s+i+d+ +gq+ks+++c++c ++s++++pf++lslpvp+
   Q: 345  SQELLAFLLDGLHEDLNQVKCKPYEEAKDASgrpDEEVADEYWSNHLARNDSVIVDTCHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPS 434
           ******************99999999987762224555666************************************************* PP
   S: 179  keetkke................................................................................... 185
             ++ ++                                                                                   
   Q: 435  TAKRVMTvtvfstdgsrepcsydvsvpkfgtlsdlvqalsivcllgddeillvtevynnciiryleepsdsvsllrdgdklaayrlpkrh 524
           **99888*********************************************************************************** PP
   S: 186  .......................................................................................... 185
                                                                                                     
   Q: 525  eksplvvfthqhfvqhssdgnltpqmrefeapllaalpeeisglslqdiylkllspfqlsngasslndcmesnsdsvdtpsdsgsinfqn 614
           ****************************************************************************************** PP
   S: 186  .......................................................................................... 185
                                                                                                     
   Q: 615  sqledgpesnhcsasecevtkgpddlydgvsgsnkeahmdfefylksergegqqqkieinelhllletapsrlhvnvhwlqnasrkyats 704
           ****************************************************************************************** PP
   S: 186  ......................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkv 253
                                  l+ cLe+f kee l  e+++yc++ckk+q+a kkl+l++lPevL++hLkRfs+++    r+k+++ v
   Q: 705  mlnnlpeihklelipkgtedsvALHGCLEAFLKEEPLGPEDMWYCPRCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQ--FTRNKLETFV 792
           **************************************************************************8855..899******* PP
   S: 254  efple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
           +fp   Ldls+++++++e+   +  Y+L+av +H+G++++GHY+a +++e+gk W++fdD+ Vt+++e+++++     aYvlfY+r
   Q: 793  DFPTVdLDLSSYVADKSEQP--SSHYRLYAVSNHYGNMGGGHYTASIYHEEGKgWYKFDDDCVTPMSEDSIKT---PAAYVLFYRR 873
           ***999*********77666..9**************************99999*******************...********98 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MATAATASHP ASASTSGRDA LAAASSSPAA VCLVPFRWWA RVREEEAAGG VQYAATAAAS 60
PSYYGLRLLH SLLHPDLVLR LERGECRAGG GNGGGRSYAL VPADELSRAL ARQNSGLGLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCGGCGT GCCTTTTACA AATCCGAGGG GCGTAAGGAA TTCCGCCGCG TCCTCCCAGA 60
AGAAAAACAA AAGCGACAAG CGGCTCGCCC TGCGGGAGGA CCCGACGACA GCTCACTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000058	Aegilops tauschii	71.56	0.00e+00	1107.00
IUUC-Ame-010757	Astyanax mexicanus	39.88	1.00e-125	444.00
IUUC-Bdi-015062	Brachypodium distachyon	78.53	0.00e+00	1289.00
IUUC-Hvu-047108	Hordeum vulgare	75.38	0.00e+00	1086.00
IUUC-Lpe-051185	Leersia perrieri	77.14	0.00e+00	1295.00
IUUC-Ont-071834	Oreochromis niloticus	40.54	2.00e-118	420.00
IUUC-Oba-075553	Oryza barthii	78.41	0.00e+00	1320.00
IUUC-Obr-076410	Oryza brachyantha	77.12	0.00e+00	1092.00
IUUC-Ogl-077583	Oryza glaberrima	78.41	0.00e+00	1320.00
IUUC-Ogu-077990	Oryza glumaepatula	77.75	0.00e+00	1290.00
IUUC-Oin-079300	Oryza indica	78.30	0.00e+00	1316.00
IUUC-Olo-080387	Oryza longistaminata	76.69	0.00e+00	1195.00
IUUC-Ome-081963	Oryza meridionalis	77.54	0.00e+00	1274.00
IUUC-Oni-082303	Oryza nivara	77.63	0.00e+00	1291.00
IUUC-Opu-083770	Oryza punctata	78.88	0.00e+00	1327.00
IUUC-Oru-085141	Oryza rufipogon	77.94	0.00e+00	1281.00
IUUC-Osa-085641	Oryza sativa	78.30	0.00e+00	1316.00
IUUC-Pfo-097110	Poecilia formosa	39.91	2.00e-124	439.00
IUUC-Sit-109901	Setaria italica	86.82	0.00e+00	1463.00
IUUC-Sbi-114031	Sorghum bicolor	91.54	0.00e+00	1516.00
IUUC-Tni-120093	Tetraodon nigroviridis	39.64	2.00e-127	449.00
IUUC-Tae-123874	Triticum aestivum	76.20	0.00e+00	1073.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence