iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027817

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Protein TSSC1

Genbank Nucleotide ID

CABZ01067331

Gene Name

tssc1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000043417.7	ENSDART00000063738.6	ENSDARP00000063737.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-18	64.9	231	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++   +l+s++dD+++k WD+r
   Q: 231  HGQLVRDLDFnPNkqYYLASCGDDCKVKFWDVR 263
           8999*******555899**************97 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MVNKMEDDAP VIYGLEFQAR ALTAQTAETD AIRFLVGTQS LKFDNQIHII DFDDENNMIN 60
KSVLLHDAGE IWHISGSPAD KAVLTTCYNK TSESRVLTCA AVWRMPPEWE SGSHESPDDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACTCATCAT TTTTACTCTC GCGGAACTGC TGTACGTGTT ATTAGTATTT GATAAAGAGG 60
AGAATGTTTA TCTCTGAATT TCATGATATA TAAATACTTG AATGGTAAAC AAGATGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	34.62	4.00e-42	165.00
IUUC-Aml-002348	Ailuropoda melanoleuca	83.87	9.00e-120	422.00
IUUC-Atr-003028	Amborella trichopoda	34.52	8.00e-55	207.00
IUUC-Apl-004211	Anas platyrhynchos	77.59	6.00e-171	593.00
IUUC-Aca-004893	Anolis carolinensis	85.27	0.00e+00	644.00
IUUC-Aly-005975	Arabidopsis lyrata	33.42	5.00e-53	201.00
IUUC-Ath-007527	Arabidopsis thaliana	34.23	2.00e-55	209.00
IUUC-Ame-010619	Astyanax mexicanus	93.28	0.00e+00	698.00
IUUC-Bta-013035	Bos taurus	81.65	0.00e+00	651.00
IUUC-Bdi-014619	Brachypodium distachyon	34.21	1.00e-55	209.00
IUUC-Bol-016581	Brassica oleracea	33.78	4.00e-54	204.00
IUUC-Bra-017885	Brassica rapa	32.98	4.00e-54	205.00
IUUC-Cel-018344	Caenorhabditis elegans	34.12	1.00e-54	206.00
IUUC-Cja-018975	Callithrix jacchus	78.99	0.00e+00	640.00
IUUC-Cfa-020214	Canis familiaris	84.50	0.00e+00	636.00
IUUC-Cpo-021363	Cavia porcellus	82.69	3.00e-175	607.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	30.29	3.00e-44	172.00
IUUC-Csa-023240	Chlorocebus sabaeus	85.01	5.00e-180	623.00
IUUC-Cho-024713	Choloepus hoffmanni	79.47	3.00e-167	581.00
IUUC-Cin-025678	Ciona intestinalis	47.68	2.00e-105	375.00
IUUC-Csv-026022	Ciona savignyi	47.07	2.00e-102	365.00
IUUC-Dno-030097	Dasypus novemcinctus	86.30	0.00e+00	632.00
IUUC-Dme-031866	Drosophila melanogaster	37.82	1.00e-71	263.00
IUUC-Ete-032575	Echinops telfairi	74.09	5.00e-125	440.00
IUUC-Eca-034323	Equus caballus	84.25	2.00e-135	474.00
IUUC-Eeu-035217	Erinaceus europaeus	65.63	1.00e-128	452.00
IUUC-Fca-035709	Felis catus	83.94	1.00e-160	559.00
IUUC-Fal-036989	Ficedula albicollis	85.53	0.00e+00	632.00
IUUC-Gmo-038623	Gadus morhua	76.03	2.00e-164	571.00
IUUC-Gga-040157	Gallus gallus	85.01	0.00e+00	637.00
IUUC-Gac-041368	Gasterosteus aculeatus	67.60	3.00e-125	441.00
IUUC-Gma-044196	Glycine max	32.16	2.00e-52	199.00
IUUC-Ggo-044513	Gorilla gorilla	79.61	3.00e-175	607.00
IUUC-Hsa-046844	Homo sapiens	79.71	2.00e-176	611.00
IUUC-Hvu-047435	Hordeum vulgare	34.56	4.00e-56	211.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	83.28	3.00e-139	487.00
IUUC-Lch-049696	Latimeria chalumnae	87.34	0.00e+00	663.00
IUUC-Lpe-050988	Leersia perrieri	33.56	3.00e-42	165.00
IUUC-Loc-052440	Lepisosteus oculatus	90.21	0.00e+00	676.00
IUUC-Laf-054088	Loxodonta africana	85.27	3.00e-179	621.00
IUUC-Mcc-055575	Macaca mulatta	78.16	5.00e-167	580.00
IUUC-Meu-056807	Macropus eugenii	66.43	9.00e-132	463.00
IUUC-Mtr-058599	Medicago truncatula	32.43	6.00e-52	197.00
IUUC-Mga-059336	Meleagris gallopavo	82.95	3.00e-172	597.00
IUUC-Mmr-061706	Microcebus murinus	85.01	0.00e+00	629.00
IUUC-Mdo-062736	Monodelphis domestica	85.53	1.00e-176	612.00
IUUC-Mmu-064265	Mus musculus	84.24	0.00e+00	662.00
IUUC-Mac-065342	Musa acuminata	33.07	3.00e-52	199.00
IUUC-Mpu-066514	Mustela putorius furo	83.20	0.00e+00	661.00
IUUC-Mlu-067072	Myotis lucifugus	84.26	4.00e-103	367.00
IUUC-Nle-069307	Nomascus leucogenys	76.33	1.00e-164	572.00
IUUC-Opr-070283	Ochotona princeps	66.93	3.00e-136	478.00
IUUC-Ont-072532	Oreochromis niloticus	87.86	0.00e+00	652.00
IUUC-Oan-073222	Ornithorhynchus anatinus	83.48	4.00e-173	600.00
IUUC-Oba-075849	Oryza barthii	34.62	2.00e-42	166.00
IUUC-Obr-076488	Oryza brachyantha	33.24	6.00e-49	187.00
IUUC-Ogl-077928	Oryza glaberrima	34.92	4.00e-45	175.00
IUUC-Ogu-077997	Oryza glumaepatula	34.62	1.00e-42	167.00
IUUC-Oin-079848	Oryza indica	34.92	9.00e-45	174.00
IUUC-Oni-082492	Oryza nivara	34.62	1.00e-42	167.00
IUUC-Oru-085119	Oryza rufipogon	34.62	1.00e-42	167.00
IUUC-Osa-086152	Oryza sativa	34.92	3.00e-45	175.00
IUUC-Ola-086694	Oryzias latipes	77.57	0.00e+00	647.00
IUUC-Olu-087749	Ostreococcus lucimarinus	35.86	9.00e-28	116.00
IUUC-Oga-088180	Otolemur garnettii	85.33	2.00e-136	478.00
IUUC-Oar-089621	Ovis aries	64.72	1.00e-127	449.00
IUUC-Ptr-091053	Pan troglodytes	80.62	2.00e-174	605.00
IUUC-Pan-091918	Papio anubis	84.50	1.00e-178	619.00
IUUC-Psi-093545	Pelodiscus sinensis	85.01	2.00e-179	621.00
IUUC-Pma-094439	Petromyzon marinus	73.54	5.00e-166	577.00
IUUC-Pfo-096127	Poecilia formosa	87.34	0.00e+00	671.00
IUUC-Pab-097916	Pongo abelii	76.33	1.00e-171	595.00
IUUC-Pop-098864	Populus trichocarpa	31.93	2.00e-51	196.00
IUUC-Pca-100797	Procavia capensis	73.78	2.00e-111	396.00
IUUC-Ppe-101796	Prunus persica	33.25	2.00e-55	209.00
IUUC-Pva-103228	Pteropus vampyrus	76.09	1.00e-174	605.00
IUUC-Rno-104877	Rattus norvegicus	83.46	0.00e+00	632.00
IUUC-Sha-106940	Sarcophilus harrisii	84.28	0.00e+00	634.00
IUUC-Smo-109355	Selaginella moellendorffii	33.42	4.00e-60	225.00
IUUC-Sit-109958	Setaria italica	34.95	2.00e-55	210.00
IUUC-Sly-111871	Solanum lycopersicum	34.05	4.00e-54	204.00
IUUC-Stu-112128	Solanum tuberosum	32.97	4.00e-51	195.00
IUUC-Sar-113084	Sorex araneus	68.79	5.00e-105	374.00
IUUC-Sbi-114122	Sorghum bicolor	33.95	2.00e-54	206.00
IUUC-Ssc-115385	Sus scrofa	82.69	1.00e-180	625.00
IUUC-Tgu-117090	Taeniopygia guttata	82.84	5.00e-174	603.00
IUUC-Tru-118548	Takifugu rubripes	77.57	0.00e+00	637.00
IUUC-Tsy-119435	Tarsius syrichta	79.47	1.00e-169	588.00
IUUC-Tni-120311	Tetraodon nigroviridis	74.81	1.00e-160	558.00
IUUC-Tca-121141	Theobroma cacao	32.71	5.00e-50	192.00
IUUC-Tae-122717	Triticum aestivum	34.56	6.00e-56	211.00
IUUC-Tbe-127623	Tupaia belangeri	58.45	3.00e-101	361.00
IUUC-Ttr-128706	Tursiops truncatus	69.77	1.00e-144	506.00
IUUC-Vvi-130871	Vitis vinifera	33.33	1.00e-49	190.00
IUUC-Xtr-131950	Xenopus tropicalis	83.46	0.00e+00	645.00
IUUC-Xma-133364	Xiphophorus maculatus	87.34	0.00e+00	670.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence