iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016925

Ensembl Protein ID

Bra006634.1-P

UniProt Accession

M4CQZ3; M4CQZ3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006634	Bra006634.1	Bra006634.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-07	31.8	792	832

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w    +  s + +CP+Cr
   Q: 792  CPICLEAFED-AVLTPCAHRLCRECLlASW----R-NSSSGLCPVCR 832
           **********.888***********99999....4.455556****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGTKVSDHLL STVRSVVGSD YSDMDIIRAL HMANLDPTAA INIIFDTPSF SKPNDIAAAA 60
AAANSTPRGV NGGKRMEDGL KVCPFSEGAA NHHRVEEEVD ESVSGDECWW FVGCSELSGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGACGA AAGTTTCAGA CCATCTGCTC TCCACCGTCA GATCAGTCGT GGGATCCGAT 60
TACTCAGACA TGGACATAAT CAGAGCCCTT CACATGGCGA ATCTCGATCC CACGGCTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0009294--P:DNA mediated transformation
GO:0045003--P:double-strand break repair via synthesis-dependent strand annealing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	64.62	0.00e+00	1349.00
IUUC-Aly-006331	Arabidopsis lyrata	85.36	0.00e+00	1756.00
IUUC-Ath-007517	Arabidopsis thaliana	86.13	0.00e+00	1764.00
IUUC-Bdi-014646	Brachypodium distachyon	62.88	0.00e+00	1255.00
IUUC-Bol-015484	Brassica oleracea	97.08	0.00e+00	1924.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	26.17	9.00e-57	215.00
IUUC-Csv-026168	Ciona savignyi	28.16	8.00e-62	231.00
IUUC-Cme-027110	Cyanidioschyzon merolae	37.88	2.00e-128	453.00
IUUC-Ggr-039735	Gaeumannomyces graminis	33.40	2.00e-131	463.00
IUUC-Gma-042995	Glycine max	69.51	0.00e+00	1438.00
IUUC-Hvu-047495	Hordeum vulgare	63.35	0.00e+00	1028.00
IUUC-Kpa-049087	Komagataella pastoris	33.72	1.00e-106	381.00
IUUC-Lpe-051584	Leersia perrieri	61.79	0.00e+00	1174.00
IUUC-Mor-057210	Magnaporthe oryzae	33.02	2.00e-133	470.00
IUUC-Mpo-057407	Magnaporthe poae	32.42	6.00e-137	481.00
IUUC-Mtr-058565	Medicago truncatula	66.35	0.00e+00	1357.00
IUUC-Mvi-060322	Microbotryum violaceum	31.94	6.00e-88	319.00
IUUC-Mac-065174	Musa acuminata	56.43	0.00e+00	655.00
IUUC-Oba-075937	Oryza barthii	64.19	0.00e+00	1149.00
IUUC-Obr-076403	Oryza brachyantha	68.04	0.00e+00	1206.00
IUUC-Ogl-077573	Oryza glaberrima	63.35	0.00e+00	1286.00
IUUC-Ogu-077957	Oryza glumaepatula	64.14	0.00e+00	1164.00
IUUC-Oin-079146	Oryza indica	68.14	0.00e+00	1259.00
IUUC-Olo-080437	Oryza longistaminata	56.91	0.00e+00	996.00
IUUC-Ome-081448	Oryza meridionalis	61.64	0.00e+00	1221.00
IUUC-Oni-082389	Oryza nivara	63.75	0.00e+00	1138.00
IUUC-Opu-083322	Oryza punctata	65.43	0.00e+00	1159.00
IUUC-Oru-085066	Oryza rufipogon	64.15	0.00e+00	1162.00
IUUC-Osa-085686	Oryza sativa	70.26	0.00e+00	1144.00
IUUC-Pan-092579	Papio anubis	36.87	4.00e-61	229.00
IUUC-Pno-094916	Phaeosphaeria nodorum	33.22	1.00e-130	461.00
IUUC-Ppa-095877	Physcomitrella patens	56.51	0.00e+00	1052.00
IUUC-Pop-099320	Populus trichocarpa	71.36	0.00e+00	1453.00
IUUC-Ppe-101820	Prunus persica	71.09	0.00e+00	1427.00
IUUC-Ptt-103829	Puccinia triticina	28.59	5.00e-95	342.00
IUUC-Smo-108977	Selaginella moellendorffii	71.31	1.00e-161	562.00
IUUC-Sit-110076	Setaria italica	68.21	0.00e+00	1227.00
IUUC-Sly-111908	Solanum lycopersicum	67.78	0.00e+00	1405.00
IUUC-Sbi-113927	Sorghum bicolor	62.84	0.00e+00	1242.00
IUUC-Sre-115131	Sporisorium reilianum	34.10	9.00e-123	434.00
IUUC-Tca-121137	Theobroma cacao	71.43	0.00e+00	1479.00
IUUC-Tae-123334	Triticum aestivum	66.60	0.00e+00	1234.00
IUUC-Tur-126433	Triticum urartu	65.52	0.00e+00	942.00
IUUC-Tme-126953	Tuber melanosporum	32.66	2.00e-130	460.00
IUUC-Tbe-127642	Tupaia belangeri	37.92	4.00e-45	176.00
IUUC-Uma-129629	Ustilago maydis	33.41	2.00e-120	427.00
IUUC-Vvi-130943	Vitis vinifera	69.96	0.00e+00	1454.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence