iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047445

Ensembl Protein ID

MLOC_17465.1

UniProt Accession

F2ELU1; F2ELU1_HORVV

Genbank Protein ID

BAK08313.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK377119

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_17465	MLOC_17465.1	MLOC_17465.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-35	118.5	219	257
UBD/Beta-Prp	3.30e-43	149.0	220	445

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v+cl+    + +ll sGs+D t kvW++++ ++l 
   Q: 219  HSDAVSCLSPtdAGqGLLYSGSWDRTFKVWRISDSKCLE 257
           9********97733699***************9999986 PP

UBD/Beta-Prp

   S: 10   ksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls....tgkcvhtlkghedsvls 99
           ++ ++c+     ++ ll +gs+d+t kvw++++ k+l+s+  h++ v+a+    dg +  tgs D+t+kvw  +++    + ++v+tl ++e+ v +
   Q: 220  SDAVSCLSPtDAGQGLLYSGSWDRTFKVWRISDSKCLESVVAHDDNVNAIVAAYDG-LVFTGSADGTVKVWkrEVQgkgtKHSPVQTLLKQEHAVNA 315
           44444454436678899**************************************9.**************554448888999******99****99 PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvysls...fdsn 191
           l++s+   +l  Gs+d  +++w+ +++ +   +l+gh+++v c++  +   ll+sGs+D+t+++W+      ++l  l+g ht+++++l+   +  n
   Q: 316  LAVSAVAPVLYCGSSDGLVNCWEGDSKLVHGGVLRGHKKAVFCLAAAG--ALLFSGSADNTIMVWRRdaGVHSCLSVLSG-HTEPIRCLAvveY--N 407
           9999999***************8877777777**************99..***************99556679******9.*********8553..4 PP
   S: 192  g..................kelvsgsldgtvklwdlqt 211
           +                    + sgsld+++k+w +  
   Q: 408  KenvaaaaaetgdnngvgrWIVYSGSLDKSIKVWRVTD 445
           4558888888888889*988999***********9964 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MRDSDGEGAG GGLPRSHPSN IPLPMSHSDP NYSGTDDECS NRQSSSSATG GASPGFYNDY 60
PSSFSGECSP YNMSPWNQTM ASPWSHHSEA SMAAPAMAPG TSLISSLVRE EGHIYSLAAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCTCTCC ACCACGGTCT CGCCGCGCCG CCACAGCCTC CGACAAAGAG CTAGCCTATG 60
AGAGATAGCG ACGGCGAAGG GGCCGGCGGC GGACTCCCGC GCTCGCACCC CTCCAACATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002457	Amborella trichopoda	61.03	4.00e-145	506.00
IUUC-Ath-006909	Arabidopsis thaliana	58.41	2.00e-137	481.00
IUUC-Bdi-014024	Brachypodium distachyon	91.74	0.00e+00	830.00
IUUC-Bol-015603	Brassica oleracea	59.16	2.00e-116	411.00
IUUC-Bra-017125	Brassica rapa	59.67	8.00e-138	482.00
IUUC-Gma-043481	Glycine max	58.66	3.00e-136	477.00
IUUC-Lpe-051623	Leersia perrieri	83.44	0.00e+00	680.00
IUUC-Mtr-057641	Medicago truncatula	58.33	1.00e-137	481.00
IUUC-Mac-065467	Musa acuminata	52.44	1.00e-101	362.00
IUUC-Oba-075783	Oryza barthii	84.69	0.00e+00	752.00
IUUC-Obr-076198	Oryza brachyantha	83.61	0.00e+00	738.00
IUUC-Ogl-077280	Oryza glaberrima	84.69	0.00e+00	752.00
IUUC-Ogu-078924	Oryza glumaepatula	85.31	0.00e+00	753.00
IUUC-Oin-079931	Oryza indica	84.69	0.00e+00	752.00
IUUC-Olo-080744	Oryza longistaminata	90.03	2.00e-180	624.00
IUUC-Oni-082948	Oryza nivara	84.69	0.00e+00	752.00
IUUC-Opu-083881	Oryza punctata	85.07	0.00e+00	751.00
IUUC-Oru-084999	Oryza rufipogon	84.69	0.00e+00	752.00
IUUC-Osa-085749	Oryza sativa	84.69	0.00e+00	752.00
IUUC-Ppa-095309	Physcomitrella patens	42.49	4.00e-74	270.00
IUUC-Pop-099113	Populus trichocarpa	60.63	3.00e-141	493.00
IUUC-Ppe-101355	Prunus persica	58.74	9.00e-134	468.00
IUUC-Smo-108849	Selaginella moellendorffii	36.61	1.00e-49	189.00
IUUC-Sit-109859	Setaria italica	83.37	0.00e+00	685.00
IUUC-Sly-111340	Solanum lycopersicum	58.69	3.00e-123	433.00
IUUC-Stu-112836	Solanum tuberosum	56.31	8.00e-133	465.00
IUUC-Sbi-114260	Sorghum bicolor	84.22	0.00e+00	731.00
IUUC-Tca-121208	Theobroma cacao	59.39	4.00e-140	489.00
IUUC-Tae-123171	Triticum aestivum	71.56	0.00e+00	677.00
IUUC-Tur-126539	Triticum urartu	93.50	1.00e-159	554.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence